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102 results
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IslandViewer: an integrated interface for computational identification and visualization of genomic islands.
Langille MG, Brinkman FS. Langille MG, et al. Among authors: brinkman fs. Bioinformatics. 2009 Mar 1;25(5):664-5. doi: 10.1093/bioinformatics/btp030. Epub 2009 Jan 16. Bioinformatics. 2009. PMID: 19151094 Free PMC article.
PhyloBLAST: facilitating phylogenetic analysis of BLAST results.
Brinkman FS, Wan I, Hancock RE, Rose AM, Jones SJ. Brinkman FS, et al. Bioinformatics. 2001 Apr;17(4):385-7. doi: 10.1093/bioinformatics/17.4.385. Bioinformatics. 2001. PMID: 11301315
Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast.
Brinkman FS, Blanchard JL, Cherkasov A, Av-Gay Y, Brunham RC, Fernandez RC, Finlay BB, Otto SP, Ouellette BF, Keeling PJ, Rose AM, Hancock RE, Jones SJ, Greberg H. Brinkman FS, et al. Genome Res. 2002 Aug;12(8):1159-67. doi: 10.1101/gr.341802. Genome Res. 2002. PMID: 12176923 Free PMC article.
IslandPath: aiding detection of genomic islands in prokaryotes.
Hsiao W, Wan I, Jones SJ, Brinkman FS. Hsiao W, et al. Among authors: brinkman fs. Bioinformatics. 2003 Feb 12;19(3):418-20. doi: 10.1093/bioinformatics/btg004. Bioinformatics. 2003. PMID: 12584130
PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria.
Gardy JL, Spencer C, Wang K, Ester M, Tusnády GE, Simon I, Hua S, deFays K, Lambert C, Nakai K, Brinkman FS. Gardy JL, et al. Among authors: brinkman fs. Nucleic Acids Res. 2003 Jul 1;31(13):3613-7. doi: 10.1093/nar/gkg602. Nucleic Acids Res. 2003. PMID: 12824378 Free PMC article.
ArrayPipe: a flexible processing pipeline for microarray data.
Hokamp K, Roche FM, Acab M, Rousseau ME, Kuo B, Goode D, Aeschliman D, Bryan J, Babiuk LA, Hancock RE, Brinkman FS. Hokamp K, et al. Among authors: brinkman fs. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W457-9. doi: 10.1093/nar/gkh446. Nucleic Acids Res. 2004. PMID: 15215429 Free PMC article.
ProbeLynx: a tool for updating the association of microarray probes to genes.
Roche FM, Hokamp K, Acab M, Babiuk LA, Hancock RE, Brinkman FS. Roche FM, et al. Among authors: brinkman fs. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W471-4. doi: 10.1093/nar/gkh452. Nucleic Acids Res. 2004. PMID: 15215432 Free PMC article.
PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis.
Gardy JL, Laird MR, Chen F, Rey S, Walsh CJ, Ester M, Brinkman FS. Gardy JL, et al. Among authors: brinkman fs. Bioinformatics. 2005 Mar 1;21(5):617-23. doi: 10.1093/bioinformatics/bti057. Epub 2004 Oct 22. Bioinformatics. 2005. PMID: 15501914
CONTACT: psort-mail@sfu.ca, brinkman@sfu.ca SUPPLEMENTARY INFORMATION: http://www.psort.org/psortb/supplementaryinfo.html....
CONTACT: psort-mail@sfu.ca, brinkman@sfu.ca SUPPLEMENTARY INFORMATION: http://www.psort.org/psortb/supplementaryinfo.html....
PSORTdb: a protein subcellular localization database for bacteria.
Rey S, Acab M, Gardy JL, Laird MR, deFays K, Lambert C, Brinkman FS. Rey S, et al. Among authors: brinkman fs. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D164-8. doi: 10.1093/nar/gki027. Nucleic Acids Res. 2005. PMID: 15608169 Free PMC article.
Pseudomonas aeruginosa Genome Database and PseudoCAP: facilitating community-based, continually updated, genome annotation.
Winsor GL, Lo R, Ho Sui SJ, Ung KS, Huang S, Cheng D, Ching WK, Hancock RE, Brinkman FS. Winsor GL, et al. Among authors: brinkman fs. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D338-43. doi: 10.1093/nar/gki047. Nucleic Acids Res. 2005. PMID: 15608211 Free PMC article.
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