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Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis.
Bergiers I, Andrews T, Vargel Bölükbaşı Ö, Buness A, Janosz E, Lopez-Anguita N, Ganter K, Kosim K, Celen C, Itır Perçin G, Collier P, Baying B, Benes V, Hemberg M, Lancrin C. Bergiers I, et al. Among authors: Buness A. Elife. 2018 Mar 20;7:e29312. doi: 10.7554/eLife.29312. Elife. 2018. PMID: 29555020 Free PMC article.
Nuclear Architecture Organized by Rif1 Underpins the Replication-Timing Program.
Foti R, Gnan S, Cornacchia D, Dileep V, Bulut-Karslioglu A, Diehl S, Buness A, Klein FA, Huber W, Johnstone E, Loos R, Bertone P, Gilbert DM, Manke T, Jenuwein T, Buonomo SC. Foti R, et al. Among authors: Buness A. Version 2. Mol Cell. 2016 Jan 21;61(2):260-73. doi: 10.1016/j.molcel.2015.12.001. Epub 2015 Dec 24. Mol Cell. 2016. PMID: 26725008 Free PMC article.
Loss of aquaporin-4 expression and putative function in non-small cell lung cancer.
Warth A, Muley T, Meister M, Herpel E, Pathil A, Hoffmann H, Schnabel PA, Bender C, Buness A, Schirmacher P, Kuner R. Warth A, et al. Among authors: Buness A. BMC Cancer. 2011 May 6;11:161. doi: 10.1186/1471-2407-11-161. BMC Cancer. 2011. PMID: 21548930 Free PMC article.
Down-regulation of HLA Class I and NKG2D ligands through a concerted action of MAPK and DNA methyltransferases in colorectal cancer cells.
Sers C, Kuner R, Falk CS, Lund P, Sueltmann H, Braun M, Buness A, Ruschhaupt M, Conrad J, Mang-Fatehi S, Stelniec I, Krapfenbauer U, Poustka A, Schäfer R. Sers C, et al. Among authors: Buness A. Int J Cancer. 2009 Oct 1;125(7):1626-39. doi: 10.1002/ijc.24557. Int J Cancer. 2009. PMID: 19569244
Molecular cancer phenotype in normal prostate tissue.
Schlomm T, Hellwinkel OJ, Buness A, Ruschhaupt M, Lübke AM, Chun FK, Simon R, Budäus L, Erbersdobler A, Graefen M, Huland H, Poustka A, Sültmann H. Schlomm T, et al. Among authors: Buness A. Eur Urol. 2009 Apr;55(4):885-90. doi: 10.1016/j.eururo.2008.04.105. Epub 2008 May 16. Eur Urol. 2009. PMID: 18501497
Identification of a common gene expression signature in dilated cardiomyopathy across independent microarray studies.
Barth AS, Kuner R, Buness A, Ruschhaupt M, Merk S, Zwermann L, Kääb S, Kreuzer E, Steinbeck G, Mansmann U, Poustka A, Nabauer M, Sültmann H. Barth AS, et al. Among authors: Buness A. J Am Coll Cardiol. 2006 Oct 17;48(8):1610-7. doi: 10.1016/j.jacc.2006.07.026. Epub 2006 Sep 27. J Am Coll Cardiol. 2006. PMID: 17045896
Identification of aberrant chromosomal regions from gene expression microarray studies applied to human breast cancer.
Buness A, Kuner R, Ruschhaupt M, Poustka A, Sültmann H, Tresch A. Buness A, et al. Bioinformatics. 2007 Sep 1;23(17):2273-80. doi: 10.1093/bioinformatics/btm340. Epub 2007 Jun 28. Bioinformatics. 2007. PMID: 17599933
AVAILABILITY: The R source codes which implement the method and an exemplary analysis are available at http://www.dkfz.de/mga2/people/buness/CTP/. ...
AVAILABILITY: The R source codes which implement the method and an exemplary analysis are available at http://www.dkfz.de/mga2/people/bun
Identification of cellular targets for the human papillomavirus E6 and E7 oncogenes by RNA interference and transcriptome analyses.
Kuner R, Vogt M, Sultmann H, Buness A, Dymalla S, Bulkescher J, Fellmann M, Butz K, Poustka A, Hoppe-Seyler F. Kuner R, et al. Among authors: Buness A. J Mol Med (Berl). 2007 Nov;85(11):1253-62. doi: 10.1007/s00109-007-0230-1. Epub 2007 Jun 23. J Mol Med (Berl). 2007. PMID: 17589817
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