Butte AJ - Search Results

1

Vodovotz Y, Xia A, Read EL, Bassaganya-Riera J, Hafler DA, Sontag E, Wang J, Tsang JS, Day JD, Kleinstein SH, Butte AJ, Altman MC, Hammond R, Sealfon SC. Vodovotz Y, et al. Among authors: butte aj. Trends Immunol. 2017 Feb;38(2):116-127. doi: 10.1016/j.it.2016.11.006. Epub 2016 Dec 13. Trends Immunol. 2017. PMID: 27986392 Free PMC article. Review.

2

RImmPort: an R/Bioconductor package that enables ready-for-analysis immunology research data.

Shankar RD, Bhattacharya S, Jujjavarapu C, Andorf S, Wiser JA, Butte AJ. Shankar RD, et al. Among authors: butte aj. Bioinformatics. 2017 Apr 1;33(7):1101-1103. doi: 10.1093/bioinformatics/btw719. Bioinformatics. 2017. PMID: 28057685 Free PMC article.

3

Challenges in bioinformatics: infrastructure, models and analytics.

Butte AJ. Butte AJ. Trends Biotechnol. 2001 May;19(5):159-60. doi: 10.1016/s0167-7799(01)01603-1. Trends Biotechnol. 2001. PMID: 11403022 No abstract available.

4

Applications of translational bioinformatics in transplantation.

Khatri P, Sarwal MM, Butte AJ. Khatri P, et al. Among authors: butte aj. Clin Pharmacol Ther. 2011 Aug;90(2):323-7. doi: 10.1038/clpt.2011.120. Epub 2011 Jun 29. Clin Pharmacol Ther. 2011. PMID: 21716268 Free PMC article. No abstract available.

5

Immune modulators in disease: integrating knowledge from the biomedical literature and gene expression.

Geifman N, Bhattacharya S, Butte AJ. Geifman N, et al. Among authors: butte aj. J Am Med Inform Assoc. 2016 May;23(3):617-26. doi: 10.1093/jamia/ocv166. Epub 2015 Dec 11. J Am Med Inform Assoc. 2016. PMID: 26661719 Free PMC article.

6

ImmPort, toward repurposing of open access immunological assay data for translational and clinical research.

Bhattacharya S, Dunn P, Thomas CG, Smith B, Schaefer H, Chen J, Hu Z, Zalocusky KA, Shankar RD, Shen-Orr SS, Thomson E, Wiser J, Butte AJ. Bhattacharya S, et al. Among authors: butte aj. Sci Data. 2018 Feb 27;5:180015. doi: 10.1038/sdata.2018.15. Sci Data. 2018. PMID: 29485622 Free PMC article.

7

Network medicine in disease analysis and therapeutics.

Chen B, Butte AJ. Chen B, et al. Among authors: butte aj. Clin Pharmacol Ther. 2013 Dec;94(6):627-9. doi: 10.1038/clpt.2013.181. Clin Pharmacol Ther. 2013. PMID: 24241637 Free PMC article.

8

Integrating Clinical Phenotype and Gene Expression Data to Prioritize Novel Drug Uses.

Paik H, Chen B, Sirota M, Hadley D, Butte AJ. Paik H, et al. Among authors: butte aj. CPT Pharmacometrics Syst Pharmacol. 2016 Nov;5(11):599-607. doi: 10.1002/psp4.12108. Epub 2016 Nov 14. CPT Pharmacometrics Syst Pharmacol. 2016. PMID: 27860440 Free PMC article.

9

Reversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets.

Chen B, Ma L, Paik H, Sirota M, Wei W, Chua MS, So S, Butte AJ. Chen B, et al. Among authors: butte aj. Nat Commun. 2017 Jul 12;8:16022. doi: 10.1038/ncomms16022. Nat Commun. 2017. PMID: 28699633 Free PMC article.

10

Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage.

Aran D, Looney AP, Liu L, Wu E, Fong V, Hsu A, Chak S, Naikawadi RP, Wolters PJ, Abate AR, Butte AJ, Bhattacharya M. Aran D, et al. Among authors: butte aj. Nat Immunol. 2019 Feb;20(2):163-172. doi: 10.1038/s41590-018-0276-y. Epub 2019 Jan 14. Nat Immunol. 2019. PMID: 30643263 Free PMC article.

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