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NetAligner--a network alignment server to compare complexes, pathways and whole interactomes.
Pache RA, Céol A, Aloy P. Pache RA, et al. Among authors: ceol a. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W157-61. doi: 10.1093/nar/gks446. Epub 2012 May 22. Nucleic Acids Res. 2012. PMID: 22618871 Free PMC article.
Interactome3D: adding structural details to protein networks.
Mosca R, Céol A, Aloy P. Mosca R, et al. Among authors: ceol a. Nat Methods. 2013 Jan;10(1):47-53. doi: 10.1038/nmeth.2289. Epub 2012 Dec 16. Nat Methods. 2013. PMID: 23399932
Towards a detailed atlas of protein-protein interactions.
Mosca R, Pons T, Céol A, Valencia A, Aloy P. Mosca R, et al. Among authors: ceol a. Curr Opin Struct Biol. 2013 Dec;23(6):929-40. doi: 10.1016/j.sbi.2013.07.005. Epub 2013 Jul 26. Curr Opin Struct Biol. 2013. PMID: 23896349 Review.
MINT: the Molecular INTeraction database.
Chatr-aryamontri A, Ceol A, Palazzi LM, Nardelli G, Schneider MV, Castagnoli L, Cesareni G. Chatr-aryamontri A, et al. Among authors: ceol a. Nucleic Acids Res. 2007 Jan;35(Database issue):D572-4. doi: 10.1093/nar/gkl950. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135203 Free PMC article.
MINT, the molecular interaction database: 2009 update.
Ceol A, Chatr Aryamontri A, Licata L, Peluso D, Briganti L, Perfetto L, Castagnoli L, Cesareni G. Ceol A, et al. Nucleic Acids Res. 2010 Jan;38(Database issue):D532-9. doi: 10.1093/nar/gkp983. Epub 2009 Nov 6. Nucleic Acids Res. 2010. PMID: 19897547 Free PMC article.
VirusMINT: a viral protein interaction database.
Chatr-aryamontri A, Ceol A, Peluso D, Nardozza A, Panni S, Sacco F, Tinti M, Smolyar A, Castagnoli L, Vidal M, Cusick ME, Cesareni G. Chatr-aryamontri A, et al. Among authors: ceol a. Nucleic Acids Res. 2009 Jan;37(Database issue):D669-73. doi: 10.1093/nar/gkn739. Epub 2008 Oct 30. Nucleic Acids Res. 2009. PMID: 18974184 Free PMC article.
DOMINO: a database of domain-peptide interactions.
Ceol A, Chatr-aryamontri A, Santonico E, Sacco R, Castagnoli L, Cesareni G. Ceol A, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D557-60. doi: 10.1093/nar/gkl961. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135199 Free PMC article.
dSysMap: exploring the edgetic role of disease mutations.
Mosca R, Tenorio-Laranga J, Olivella R, Alcalde V, Céol A, Soler-López M, Aloy P. Mosca R, et al. Among authors: ceol a. Nat Methods. 2015 Mar;12(3):167-8. doi: 10.1038/nmeth.3289. Nat Methods. 2015. PMID: 25719824 No abstract available.
The binary protein-protein interaction landscape of Escherichia coli.
Rajagopala SV, Sikorski P, Kumar A, Mosca R, Vlasblom J, Arnold R, Franca-Koh J, Pakala SB, Phanse S, Ceol A, Häuser R, Siszler G, Wuchty S, Emili A, Babu M, Aloy P, Pieper R, Uetz P. Rajagopala SV, et al. Among authors: ceol a. Nat Biotechnol. 2014 Mar;32(3):285-290. doi: 10.1038/nbt.2831. Epub 2014 Feb 23. Nat Biotechnol. 2014. PMID: 24561554 Free PMC article.
3did: a catalog of domain-based interactions of known three-dimensional structure.
Mosca R, Céol A, Stein A, Olivella R, Aloy P. Mosca R, et al. Among authors: ceol a. Nucleic Acids Res. 2014 Jan;42(Database issue):D374-9. doi: 10.1093/nar/gkt887. Epub 2013 Sep 29. Nucleic Acids Res. 2014. PMID: 24081580 Free PMC article.
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