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Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.
Sivade Dumousseau M, Alonso-López D, Ammari M, Bradley G, Campbell NH, Ceol A, Cesareni G, Combe C, De Las Rivas J, Del-Toro N, Heimbach J, Hermjakob H, Jurisica I, Koch M, Licata L, Lovering RC, Lynn DJ, Meldal BHM, Micklem G, Panni S, Porras P, Ricard-Blum S, Roechert B, Salwinski L, Shrivastava A, Sullivan J, Thierry-Mieg N, Yehudi Y, Van Roey K, Orchard S. Sivade Dumousseau M, et al. Among authors: ceol a. BMC Bioinformatics. 2018 Apr 11;19(1):134. doi: 10.1186/s12859-018-2118-1. BMC Bioinformatics. 2018. PMID: 29642841 Free PMC article.
Towards a detailed atlas of protein-protein interactions.
Mosca R, Pons T, Céol A, Valencia A, Aloy P. Mosca R, et al. Among authors: ceol a. Curr Opin Struct Biol. 2013 Dec;23(6):929-40. doi: 10.1016/ Epub 2013 Jul 26. Curr Opin Struct Biol. 2013. PMID: 23896349 Review.
MINT: the Molecular INTeraction database.
Chatr-aryamontri A, Ceol A, Palazzi LM, Nardelli G, Schneider MV, Castagnoli L, Cesareni G. Chatr-aryamontri A, et al. Among authors: ceol a. Nucleic Acids Res. 2007 Jan;35(Database issue):D572-4. doi: 10.1093/nar/gkl950. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135203 Free PMC article.
MINT, the molecular interaction database: 2009 update.
Ceol A, Chatr Aryamontri A, Licata L, Peluso D, Briganti L, Perfetto L, Castagnoli L, Cesareni G. Ceol A, et al. Nucleic Acids Res. 2010 Jan;38(Database issue):D532-9. doi: 10.1093/nar/gkp983. Epub 2009 Nov 6. Nucleic Acids Res. 2010. PMID: 19897547 Free PMC article.
VirusMINT: a viral protein interaction database.
Chatr-aryamontri A, Ceol A, Peluso D, Nardozza A, Panni S, Sacco F, Tinti M, Smolyar A, Castagnoli L, Vidal M, Cusick ME, Cesareni G. Chatr-aryamontri A, et al. Among authors: ceol a. Nucleic Acids Res. 2009 Jan;37(Database issue):D669-73. doi: 10.1093/nar/gkn739. Epub 2008 Oct 30. Nucleic Acids Res. 2009. PMID: 18974184 Free PMC article.
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