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151 results
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The proteomic complexity and rise of the primordial ancestor of diversified life.
Kim KM, Caetano-Anollés G. Kim KM, et al. BMC Evol Biol. 2011 May 25;11:140. doi: 10.1186/1471-2148-11-140. BMC Evol Biol. 2011. PMID: 21612591 Free PMC article.
Universal sharing patterns in proteomes and evolution of protein fold architecture and life.
Caetano-Anollés G, Caetano-Anollés D. Caetano-Anollés G, et al. J Mol Evol. 2005 Apr;60(4):484-98. doi: 10.1007/s00239-004-0221-6. J Mol Evol. 2005. PMID: 15883883
Grass evolution inferred from chromosomal rearrangements and geometrical and statistical features in RNA structure.
Caetano-Anollés G. Caetano-Anollés G. J Mol Evol. 2005 May;60(5):635-52. doi: 10.1007/s00239-004-0244-z. J Mol Evol. 2005. PMID: 15983872
MANET: tracing evolution of protein architecture in metabolic networks.
Kim HS, Mittenthal JE, Caetano-Anollés G. Kim HS, et al. BMC Bioinformatics. 2006 Jul 19;7:351. doi: 10.1186/1471-2105-7-351. BMC Bioinformatics. 2006. PMID: 16854231 Free PMC article.
Global phylogeny determined by the combination of protein domains in proteomes.
Wang M, Caetano-Anollés G. Wang M, et al. Mol Biol Evol. 2006 Dec;23(12):2444-54. doi: 10.1093/molbev/msl117. Epub 2006 Sep 13. Mol Biol Evol. 2006. PMID: 16971695
Common evolutionary trends for SINE RNA structures.
Sun FJ, Fleurdépine S, Bousquet-Antonelli C, Caetano-Anollés G, Deragon JM. Sun FJ, et al. Trends Genet. 2007 Jan;23(1):26-33. doi: 10.1016/j.tig.2006.11.005. Epub 2006 Nov 28. Trends Genet. 2007. PMID: 17126948
The origin of modern metabolic networks inferred from phylogenomic analysis of protein architecture.
Caetano-Anollés G, Kim HS, Mittenthal JE. Caetano-Anollés G, et al. Proc Natl Acad Sci U S A. 2007 May 29;104(22):9358-63. doi: 10.1073/pnas.0701214104. Epub 2007 May 21. Proc Natl Acad Sci U S A. 2007. PMID: 17517598 Free PMC article.
Gene-interleaving patterns of synteny in the Saccharomyces cerevisiae genome: are they proof of an ancient genome duplication event?
Martin N, Ruedi EA, Leduc R, Sun FJ, Caetano-Anollés G. Martin N, et al. Biol Direct. 2007 Sep 25;2:23. doi: 10.1186/1745-6150-2-23. Biol Direct. 2007. PMID: 17894859 Free PMC article.
Reductive evolution of architectural repertoires in proteomes and the birth of the tripartite world.
Wang M, Yafremava LS, Caetano-Anollés D, Mittenthal JE, Caetano-Anollés G. Wang M, et al. Genome Res. 2007 Nov;17(11):1572-85. doi: 10.1101/gr.6454307. Epub 2007 Oct 1. Genome Res. 2007. PMID: 17908824 Free PMC article.
The origin and evolution of tRNA inferred from phylogenetic analysis of structure.
Sun FJ, Caetano-Anollés G. Sun FJ, et al. J Mol Evol. 2008 Jan;66(1):21-35. doi: 10.1007/s00239-007-9050-8. Epub 2007 Dec 4. J Mol Evol. 2008. PMID: 18058157
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