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210 results
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Estimating the ancestral recombinations graph (ARG) as compatible networks of SNP patterns.
Parida L, Melé M, Calafell F, Bertranpetit J; Genographic Consortium. Parida L, et al. Among authors: calafell f. J Comput Biol. 2008 Nov;15(9):1133-54. doi: 10.1089/cmb.2008.0065. J Comput Biol. 2008. PMID: 18844583
Geographic patterns of mtDNA diversity in Europe.
Simoni L, Calafell F, Pettener D, Bertranpetit J, Barbujani G. Simoni L, et al. Among authors: calafell f. Am J Hum Genet. 2000 Jan;66(1):262-78. doi: 10.1086/302706. Am J Hum Genet. 2000. PMID: 10631156 Free PMC article.
Microsatellite variation and evolutionary history of PCDHX/Y gene pair within the Xq21.3/Yp11.2 hominid-specific homology block.
Lopes AM, Calafell F, Amorim A. Lopes AM, et al. Among authors: calafell f. Mol Biol Evol. 2004 Nov;21(11):2092-101. doi: 10.1093/molbev/msh218. Epub 2004 Aug 5. Mol Biol Evol. 2004. PMID: 15297598
Minimizing recombinations in consensus networks for phylogeographic studies.
Parida L, Javed A, Melé M, Calafell F, Bertranpetit J; Genographic Consortium. Parida L, et al. Among authors: calafell f. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S72. doi: 10.1186/1471-2105-10-S1-S72. BMC Bioinformatics. 2009. PMID: 19208177 Free PMC article.
Genetic and demographic implications of the Bantu expansion: insights from human paternal lineages.
Berniell-Lee G, Calafell F, Bosch E, Heyer E, Sica L, Mouguiama-Daouda P, van der Veen L, Hombert JM, Quintana-Murci L, Comas D. Berniell-Lee G, et al. Among authors: calafell f. Mol Biol Evol. 2009 Jul;26(7):1581-9. doi: 10.1093/molbev/msp069. Epub 2009 Apr 15. Mol Biol Evol. 2009. PMID: 19369595
On the origins and admixture of Malagasy: new evidence from high-resolution analyses of paternal and maternal lineages.
Tofanelli S, Bertoncini S, Castrì L, Luiselli D, Calafell F, Donati G, Paoli G. Tofanelli S, et al. Among authors: calafell f. Mol Biol Evol. 2009 Sep;26(9):2109-24. doi: 10.1093/molbev/msp120. Epub 2009 Jun 17. Mol Biol Evol. 2009. PMID: 19535740
Interrogating 11 fast-evolving genes for signatures of recent positive selection in worldwide human populations.
Moreno-Estrada A, Tang K, Sikora M, Marquès-Bonet T, Casals F, Navarro A, Calafell F, Bertranpetit J, Stoneking M, Bosch E. Moreno-Estrada A, et al. Among authors: calafell f. Mol Biol Evol. 2009 Oct;26(10):2285-97. doi: 10.1093/molbev/msp134. Epub 2009 Jul 3. Mol Biol Evol. 2009. PMID: 19578157
A new method to reconstruct recombination events at a genomic scale.
Melé M, Javed A, Pybus M, Calafell F, Parida L, Bertranpetit J; Genographic Consortium Members. Melé M, et al. Among authors: calafell f. PLoS Comput Biol. 2010 Nov 24;6(11):e1001010. doi: 10.1371/journal.pcbi.1001010. PLoS Comput Biol. 2010. PMID: 21124860 Free PMC article.
IRiS: construction of ARG networks at genomic scales.
Javed A, Pybus M, Melé M, Utro F, Bertranpetit J, Calafell F, Parida L. Javed A, et al. Among authors: calafell f. Bioinformatics. 2011 Sep 1;27(17):2448-50. doi: 10.1093/bioinformatics/btr423. Epub 2011 Jul 15. Bioinformatics. 2011. PMID: 21765095
Recombination gives a new insight in the effective population size and the history of the old world human populations.
Melé M, Javed A, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Pitchappan RM, Arunkumar G, Parida L, Calafell F, Bertranpetit J; Genographic Consortium. Melé M, et al. Among authors: calafell f. Mol Biol Evol. 2012 Jan;29(1):25-30. doi: 10.1093/molbev/msr213. Epub 2011 Sep 1. Mol Biol Evol. 2012. PMID: 21890475
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