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66 results
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A neural-network-based method for predicting protein stability changes upon single point mutations.
Capriotti E, Fariselli P, Casadio R. Capriotti E, et al. Bioinformatics. 2004 Aug 4;20 Suppl 1:i63-8. doi: 10.1093/bioinformatics/bth928. Bioinformatics. 2004. PMID: 15262782
Using tertiary structure for the computation of highly accurate multiple RNA alignments with the SARA-Coffee package.
Kemena C, Bussotti G, Capriotti E, Marti-Renom MA, Notredame C. Kemena C, et al. Among authors: capriotti e. Bioinformatics. 2013 May 1;29(9):1112-9. doi: 10.1093/bioinformatics/btt096. Epub 2013 Feb 28. Bioinformatics. 2013. PMID: 23449094
All-atom knowledge-based potential for RNA structure prediction and assessment.
Capriotti E, Norambuena T, Marti-Renom MA, Melo F. Capriotti E, et al. Bioinformatics. 2011 Apr 15;27(8):1086-93. doi: 10.1093/bioinformatics/btr093. Epub 2011 Feb 23. Bioinformatics. 2011. PMID: 21349865
A three-state prediction of single point mutations on protein stability changes.
Capriotti E, Fariselli P, Rossi I, Casadio R. Capriotti E, et al. BMC Bioinformatics. 2008 Mar 26;9 Suppl 2(Suppl 2):S6. doi: 10.1186/1471-2105-9-S2-S6. BMC Bioinformatics. 2008. PMID: 18387208 Free PMC article.
RNA structure alignment by a unit-vector approach.
Capriotti E, Marti-Renom MA. Capriotti E, et al. Bioinformatics. 2008 Aug 15;24(16):i112-8. doi: 10.1093/bioinformatics/btn288. Bioinformatics. 2008. PMID: 18689811
WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures.
Norambuena T, Cares JF, Capriotti E, Melo F. Norambuena T, et al. Among authors: capriotti e. Bioinformatics. 2013 Oct 15;29(20):2649-50. doi: 10.1093/bioinformatics/btt441. Epub 2013 Aug 7. Bioinformatics. 2013. PMID: 23929030 Free PMC article.
DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations.
Montanucci L, Capriotti E, Frank Y, Ben-Tal N, Fariselli P. Montanucci L, et al. Among authors: capriotti e. BMC Bioinformatics. 2019 Jul 3;20(Suppl 14):335. doi: 10.1186/s12859-019-2923-1. BMC Bioinformatics. 2019. PMID: 31266447 Free PMC article.
The WWWH of remote homolog detection: the state of the art.
Fariselli P, Rossi I, Capriotti E, Casadio R. Fariselli P, et al. Among authors: capriotti e. Brief Bioinform. 2007 Mar;8(2):78-87. doi: 10.1093/bib/bbl032. Epub 2006 Sep 26. Brief Bioinform. 2007. PMID: 17003074 Review.
Hierarchical mechanochemical switches in angiostatin.
Grandi F, Sandal M, Guarguaglini G, Capriotti E, Casadio R, Samorì B. Grandi F, et al. Among authors: capriotti e. Chembiochem. 2006 Nov;7(11):1774-82. doi: 10.1002/cbic.200600227. Chembiochem. 2006. PMID: 16991168
Diffusion-collision of foldons elucidates the kinetic effects of point mutations and suggests control strategies of the folding process of helical proteins.
Capriotti E, Compiani M. Capriotti E, et al. Proteins. 2006 Jul 1;64(1):198-209. doi: 10.1002/prot.20980. Proteins. 2006. PMID: 16609971
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