Chacón P - Search Results

1

Thorough validation of protein normal mode analysis: a comparative study with essential dynamics.

Rueda M, Chacón P, Orozco M. Rueda M, et al. Among authors: chacon p. Structure. 2007 May;15(5):565-75. doi: 10.1016/j.str.2007.03.013. Structure. 2007. PMID: 17502102 Free article.

2

Approaching Elastic Network Models to Molecular Dynamics Flexibility.

Orellana L, Rueda M, Ferrer-Costa C, Lopez-Blanco JR, Chacón P, Orozco M. Orellana L, et al. Among authors: chacon p. J Chem Theory Comput. 2010 Sep 14;6(9):2910-23. doi: 10.1021/ct100208e. J Chem Theory Comput. 2010. PMID: 26616090

3

Modeling tricks and fitting techniques for multiresolution structures.

Wriggers W, Chacón P. Wriggers W, et al. Among authors: chacon p. Structure. 2001 Sep;9(9):779-88. doi: 10.1016/s0969-2126(01)00648-7. Structure. 2001. PMID: 11566128 Free article. No abstract available.

4

Architecture of the pontin/reptin complex, essential in the assembly of several macromolecular complexes.

Torreira E, Jha S, López-Blanco JR, Arias-Palomo E, Chacón P, Cañas C, Ayora S, Dutta A, Llorca O. Torreira E, et al. Among authors: chacon p. Structure. 2008 Oct 8;16(10):1511-20. doi: 10.1016/j.str.2008.08.009. Structure. 2008. PMID: 18940606 Free PMC article.

5

Local Normal Mode Analysis for Fast Loop Conformational Sampling.

López-Blanco JR, Dehouck Y, Bastolla U, Chacón P. López-Blanco JR, et al. Among authors: chacon p. J Chem Inf Model. 2022 Sep 26;62(18):4561-4568. doi: 10.1021/acs.jcim.2c00870. Epub 2022 Sep 13. J Chem Inf Model. 2022. PMID: 36099639 Free PMC article.

6

Divergent substrate-binding mechanisms reveal an evolutionary specialization of eukaryotic prefoldin compared to its archaeal counterpart.

Martín-Benito J, Gómez-Reino J, Stirling PC, Lundin VF, Gómez-Puertas P, Boskovic J, Chacón P, Fernández JJ, Berenguer J, Leroux MR, Valpuesta JM. Martín-Benito J, et al. Among authors: chacon p. Structure. 2007 Jan;15(1):101-10. doi: 10.1016/j.str.2006.11.006. Structure. 2007. PMID: 17223536 Free article.

7

DFprot: a webtool for predicting local chain deformability.

Garzón JI, Kovacs J, Abagyan R, Chacón P. Garzón JI, et al. Among authors: chacon p. Bioinformatics. 2007 Apr 1;23(7):901-2. doi: 10.1093/bioinformatics/btm014. Epub 2007 Feb 3. Bioinformatics. 2007. PMID: 17277334

8

iMod: multipurpose normal mode analysis in internal coordinates.

Lopéz-Blanco JR, Garzón JI, Chacón P. Lopéz-Blanco JR, et al. Among authors: chacon p. Bioinformatics. 2011 Oct 15;27(20):2843-50. doi: 10.1093/bioinformatics/btr497. Epub 2011 Aug 27. Bioinformatics. 2011. PMID: 21873636

9

Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid.

Estrin E, Lopez-Blanco JR, Chacón P, Martin A. Estrin E, et al. Among authors: chacon p. Structure. 2013 Sep 3;21(9):1624-35. doi: 10.1016/j.str.2013.06.023. Epub 2013 Aug 1. Structure. 2013. PMID: 23911091 Free article.

10

Spinor product computations for protein conformations.

Chys P, Chacón P. Chys P, et al. Among authors: chacon p. J Comput Chem. 2012 Aug 5;33(21):1717-29. doi: 10.1002/jcc.23002. Epub 2012 May 8. J Comput Chem. 2012. PMID: 22565650

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