Chan HS - Search Results

1

Local site preference rationalizes disentangling by DNA topoisomerases.

Liu Z, Zechiedrich L, Chan HS. Liu Z, et al. Among authors: chan hs. Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Mar;81(3 Pt 1):031902. doi: 10.1103/PhysRevE.81.031902. Epub 2010 Mar 4. Phys Rev E Stat Nonlin Soft Matter Phys. 2010. PMID: 20365765 Free PMC article.

2

Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models.

Liu Z, Chan HS. Liu Z, et al. Among authors: chan hs. J Chem Phys. 2008 Apr 14;128(14):145104. doi: 10.1063/1.2899022. J Chem Phys. 2008. PMID: 18412482

3

Thermodynamics and kinetics of TopoII action: A consensus on T-segment curvature selection? Comment on "Disentangling DNA Molecules" by Alexander Vologodskii.

Chan HS, Liu Z. Chan HS, et al. Phys Life Rev. 2016 Sep;18:135-138. doi: 10.1016/j.plrev.2016.05.016. Epub 2016 May 27. Phys Life Rev. 2016. PMID: 27265508 No abstract available.

4

Consistent rationalization of type-2 topoisomerases' unknotting, decatenating, supercoil-relaxing actions and their scaling relation.

Liu Z, Chan HS. Liu Z, et al. Among authors: chan hs. J Phys Condens Matter. 2015 Sep 9;27(35):354103. doi: 10.1088/0953-8984/27/35/354103. Epub 2015 Aug 20. J Phys Condens Matter. 2015. PMID: 26291958

5

Action at hooked or twisted-hooked DNA juxtapositions rationalizes unlinking preference of type-2 topoisomerases.

Liu Z, Zechiedrich L, Chan HS. Liu Z, et al. Among authors: chan hs. J Mol Biol. 2010 Jul 30;400(5):963-82. doi: 10.1016/j.jmb.2010.05.007. Epub 2010 May 10. J Mol Biol. 2010. PMID: 20460130 Free PMC article.

6

The why and how of DNA unlinking.

Liu Z, Deibler RW, Chan HS, Zechiedrich L. Liu Z, et al. Among authors: chan hs. Nucleic Acids Res. 2009 Feb;37(3):661-71. doi: 10.1093/nar/gkp041. Nucleic Acids Res. 2009. PMID: 19240147 Free PMC article. Review.

7

Spatial ranges of driving forces are a key determinant of protein folding cooperativity and rate diversity.

Kaya H, Uzunoğlu Z, Chan HS. Kaya H, et al. Among authors: chan hs. Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Oct;88(4):044701. doi: 10.1103/PhysRevE.88.044701. Epub 2013 Oct 14. Phys Rev E Stat Nonlin Soft Matter Phys. 2013. PMID: 24229309

8

Hydrophobic interactions in the formation of secondary structures in small peptides.

Dias CL, Karttunen M, Chan HS. Dias CL, et al. Among authors: chan hs. Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Oct;84(4 Pt 1):041931. doi: 10.1103/PhysRevE.84.041931. Epub 2011 Oct 25. Phys Rev E Stat Nonlin Soft Matter Phys. 2011. PMID: 22181199

9

Topological information embodied in local juxtaposition geometry provides a statistical mechanical basis for unknotting by type-2 DNA topoisomerases.

Liu Z, Mann JK, Zechiedrich EL, Chan HS. Liu Z, et al. Among authors: chan hs. J Mol Biol. 2006 Aug 11;361(2):268-85. doi: 10.1016/j.jmb.2006.06.005. Epub 2006 Jun 19. J Mol Biol. 2006. PMID: 16842819

10

Inferring global topology from local juxtaposition geometry: interlinking polymer rings and ramifications for topoisomerase action.

Liu Z, Zechiedrich EL, Chan HS. Liu Z, et al. Among authors: chan hs. Biophys J. 2006 Apr 1;90(7):2344-55. doi: 10.1529/biophysj.105.076778. Biophys J. 2006. PMID: 16537549 Free PMC article.

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