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Do orthologous gene phylogenies really support tree-thinking?
Bapteste E, Susko E, Leigh J, MacLeod D, Charlebois RL, Doolittle WF. Bapteste E, et al. Among authors: charlebois rl. BMC Evol Biol. 2005 May 24;5:33. doi: 10.1186/1471-2148-5-33. BMC Evol Biol. 2005. PMID: 15913459 Free PMC article.
A simulation test bed for hypotheses of genome evolution.
Beiko RG, Charlebois RL. Beiko RG, et al. Among authors: charlebois rl. Bioinformatics. 2007 Apr 1;23(7):825-31. doi: 10.1093/bioinformatics/btm024. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267425
Weighted genome trees: refinements and applications.
Gophna U, Doolittle WF, Charlebois RL. Gophna U, et al. Among authors: charlebois rl. J Bacteriol. 2005 Feb;187(4):1305-16. doi: 10.1128/JB.187.4.1305-1316.2005. J Bacteriol. 2005. PMID: 15687194 Free PMC article.
Have archaeal genes contributed to bacterial virulence?
Gophna U, Charlebois RL, Doolittle WF. Gophna U, et al. Among authors: charlebois rl. Trends Microbiol. 2004 May;12(5):213-9. doi: 10.1016/j.tim.2004.03.002. Trends Microbiol. 2004. PMID: 15120140 Review. No abstract available.
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