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Mechanical processes in biochemistry.
Bustamante C, Chemla YR, Forde NR, Izhaky D. Bustamante C, et al. Annu Rev Biochem. 2004;73:705-48. doi: 10.1146/annurev.biochem.72.121801.161542. Annu Rev Biochem. 2004. PMID: 15189157 Review.
Substrate interactions and promiscuity in a viral DNA packaging motor.
Aathavan K, Politzer AT, Kaplan A, Moffitt JR, Chemla YR, Grimes S, Jardine PJ, Anderson DL, Bustamante C. Aathavan K, et al. Nature. 2009 Oct 1;461(7264):669-73. doi: 10.1038/nature08443. Nature. 2009. PMID: 19794496 Free PMC article.
Mechanism of force generation of a viral DNA packaging motor.
Chemla YR, Aathavan K, Michaelis J, Grimes S, Jardine PJ, Anderson DL, Bustamante C. Chemla YR, et al. Cell. 2005 Sep 9;122(5):683-92. doi: 10.1016/j.cell.2005.06.024. Cell. 2005. PMID: 16143101
Methods in statistical kinetics.
Moffitt JR, Chemla YR, Bustamante C. Moffitt JR, et al. Methods Enzymol. 2010;475:221-57. doi: 10.1016/S0076-6879(10)75010-2. Methods Enzymol. 2010. PMID: 20627160
Recent advances in optical tweezers.
Moffitt JR, Chemla YR, Smith SB, Bustamante C. Moffitt JR, et al. Annu Rev Biochem. 2008;77:205-28. doi: 10.1146/annurev.biochem.77.043007.090225. Annu Rev Biochem. 2008. PMID: 18307407 Review.
Extreme mechanical diversity of human telomeric DNA revealed by fluorescence-force spectroscopy.
Mitra J, Makurath MA, Ngo TTM, Troitskaia A, Chemla YR, Ha T. Mitra J, et al. Among authors: chemla yr. Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8350-8359. doi: 10.1073/pnas.1815162116. Epub 2019 Apr 3. Proc Natl Acad Sci U S A. 2019. PMID: 30944218 Free PMC article.
Mechanistic constraints from the substrate concentration dependence of enzymatic fluctuations.
Moffitt JR, Chemla YR, Bustamante C. Moffitt JR, et al. Proc Natl Acad Sci U S A. 2010 Sep 7;107(36):15739-44. doi: 10.1073/pnas.1006997107. Epub 2010 Aug 20. Proc Natl Acad Sci U S A. 2010. PMID: 20729471 Free PMC article.
Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.
Chowdhury F, Li IT, Ngo TT, Leslie BJ, Kim BC, Sokoloski JE, Weiland E, Wang X, Chemla YR, Lohman TM, Ha T. Chowdhury F, et al. Nano Lett. 2016 Jun 8;16(6):3892-7. doi: 10.1021/acs.nanolett.6b01403. Epub 2016 May 12. Nano Lett. 2016. PMID: 27167603 Free PMC article.
Proofreading dynamics of a processive DNA polymerase.
Ibarra B, Chemla YR, Plyasunov S, Smith SB, Lázaro JM, Salas M, Bustamante C. Ibarra B, et al. EMBO J. 2009 Sep 16;28(18):2794-802. doi: 10.1038/emboj.2009.219. Epub 2009 Aug 6. EMBO J. 2009. PMID: 19661923 Free PMC article.
Intersubunit coordination in a homomeric ring ATPase.
Moffitt JR, Chemla YR, Aathavan K, Grimes S, Jardine PJ, Anderson DL, Bustamante C. Moffitt JR, et al. Nature. 2009 Jan 22;457(7228):446-50. doi: 10.1038/nature07637. Epub 2009 Jan 7. Nature. 2009. PMID: 19129763 Free PMC article.
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