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dbGSH: a database of S-glutathionylation.
Chen YJ, Lu CT, Lee TY, Chen YJ. Chen YJ, et al. Bioinformatics. 2014 Aug 15;30(16):2386-8. doi: 10.1093/bioinformatics/btu301. Epub 2014 Apr 29. Bioinformatics. 2014. PMID: 24790154
SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity.
Lee TY, Chen YJ, Lu TC, Huang HD, Chen YJ. Lee TY, et al. Among authors: chen yj. PLoS One. 2011;6(7):e21849. doi: 10.1371/journal.pone.0021849. Epub 2011 Jul 15. PLoS One. 2011. PMID: 21789187 Free PMC article.
dbSNO: a database of cysteine S-nitrosylation.
Lee TY, Chen YJ, Lu CT, Ching WC, Teng YC, Huang HD, Chen YJ. Lee TY, et al. Among authors: chen yj. Bioinformatics. 2012 Sep 1;28(17):2293-5. doi: 10.1093/bioinformatics/bts436. Epub 2012 Jul 10. Bioinformatics. 2012. PMID: 22782549
DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications.
Lu CT, Huang KY, Su MG, Lee TY, BretaƱa NA, Chang WC, Chen YJ, Chen YJ, Huang HD. Lu CT, et al. Among authors: chen yj. Nucleic Acids Res. 2013 Jan;41(Database issue):D295-305. doi: 10.1093/nar/gks1229. Epub 2012 Nov 27. Nucleic Acids Res. 2013. PMID: 23193290 Free PMC article.
RegPhos 2.0: an updated resource to explore protein kinase-substrate phosphorylation networks in mammals.
Huang KY, Wu HY, Chen YJ, Lu CT, Su MG, Hsieh YC, Tsai CM, Lin KI, Huang HD, Lee TY, Chen YJ. Huang KY, et al. Among authors: chen yj. Database (Oxford). 2014 Apr 25;2014(0):bau034. doi: 10.1093/database/bau034. Print 2014. Database (Oxford). 2014. PMID: 24771658 Free PMC article.
Characterization and identification of protein O-GlcNAcylation sites with substrate specificity.
Wu HY, Lu CT, Kao HJ, Chen YJ, Chen YJ, Lee TY. Wu HY, et al. Among authors: chen yj. BMC Bioinformatics. 2014;15 Suppl 16(Suppl 16):S1. doi: 10.1186/1471-2105-15-S16-S1. Epub 2014 Dec 8. BMC Bioinformatics. 2014. PMID: 25521204 Free PMC article.
Glutathionylspermidine in the modification of protein SH groups: the enzymology and its application to study protein glutathionylation.
Lin JC, Chiang BY, Chou CC, Chen TC, Chen YJ, Chen YJ, Lin CH. Lin JC, et al. Among authors: chen yj, chen tc. Molecules. 2015 Jan 15;20(1):1452-74. doi: 10.3390/molecules20011452. Molecules. 2015. PMID: 25599150 Free PMC article. Review.
MITF functions as a tumor suppressor in non-small cell lung cancer beyond the canonically oncogenic role.
Hsiao YJ, Chang WH, Chen HY, Hsu YC, Chiu SC, Chiang CC, Chang GC, Chen YJ, Wang CY, Chen YM, Lin CY, Chen YJ, Yang PC, Chen JJW, Yu SL. Hsiao YJ, et al. Among authors: chen hy, chen yj, chen jjw, chen ym. Aging (Albany NY). 2020 Dec 3;12. doi: 10.18632/aging.202171. Online ahead of print. Aging (Albany NY). 2020. PMID: 33293474
S-alkylating labeling strategy for site-specific identification of the s-nitrosoproteome.
Chen YJ, Ku WC, Lin PY, Chou HC, Khoo KH, Chen YJ. Chen YJ, et al. J Proteome Res. 2010 Dec 3;9(12):6417-39. doi: 10.1021/pr100680a. Epub 2010 Nov 10. J Proteome Res. 2010. PMID: 20925432
Crystal structure and mutational analysis of aminoacylhistidine dipeptidase from Vibrio alginolyticus reveal a new architecture of M20 metallopeptidases.
Chang CY, Hsieh YC, Wang TY, Chen YC, Wang YK, Chiang TW, Chen YJ, Chang CH, Chen CJ, Wu TK. Chang CY, et al. Among authors: chen yj, chen cj, chen yc. J Biol Chem. 2010 Dec 10;285(50):39500-10. doi: 10.1074/jbc.M110.139683. Epub 2010 Sep 6. J Biol Chem. 2010. PMID: 20819954 Free PMC article.
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