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UFBoot2: Improving the Ultrafast Bootstrap Approximation.
Hoang DT, Chernomor O, von Haeseler A, Minh BQ, Vinh LS. Hoang DT, et al. Among authors: chernomor o. Mol Biol Evol. 2018 Feb 1;35(2):518-522. doi: 10.1093/molbev/msx281. Mol Biol Evol. 2018. PMID: 29077904 Free PMC article.
Split diversity in constrained conservation prioritization using integer linear programming.
Chernomor O, Minh BQ, Forest F, Klaere S, Ingram T, Henzinger M, von Haeseler A. Chernomor O, et al. Methods Ecol Evol. 2015 Jan;6(1):83-91. doi: 10.1111/2041-210X.12299. Epub 2014 Dec 6. Methods Ecol Evol. 2015. PMID: 25893087 Free PMC article.
Consequences of Common Topological Rearrangements for Partition Trees in Phylogenomic Inference.
Chernomor O, Minh BQ, von Haeseler A. Chernomor O, et al. J Comput Biol. 2015 Dec;22(12):1129-42. doi: 10.1089/cmb.2015.0146. Epub 2015 Oct 8. J Comput Biol. 2015. PMID: 26448206 Free PMC article.
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices.
Chernomor O, von Haeseler A, Minh BQ. Chernomor O, et al. Syst Biol. 2016 Nov;65(6):997-1008. doi: 10.1093/sysbio/syw037. Epub 2016 Apr 26. Syst Biol. 2016. PMID: 27121966 Free PMC article.
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.
Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R. Minh BQ, et al. Among authors: chernomor o. Mol Biol Evol. 2020 May 1;37(5):1530-1534. doi: 10.1093/molbev/msaa015. Mol Biol Evol. 2020. PMID: 32011700 Free PMC article.
Corrigendum to: IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.
Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R. Minh BQ, et al. Among authors: chernomor o. Mol Biol Evol. 2020 Aug 1;37(8):2461. doi: 10.1093/molbev/msaa131. Mol Biol Evol. 2020. PMID: 32556291 Free PMC article. No abstract available.
Complex evolution of light-dependent protochlorophyllide oxidoreductases in aerobic anoxygenic phototrophs: origin, phylogeny and function.
Chernomor O, Peters L, Schneidewind J, Loeschcke A, Knieps-Grünhagen E, Schmitz F, von Lieres E, Kutta RJ, Svensson V, Jaeger KE, Drepper T, von Haeseler A, Krauss U. Chernomor O, et al. Mol Biol Evol. 2020 Sep 15:msaa234. doi: 10.1093/molbev/msaa234. Online ahead of print. Mol Biol Evol. 2020. PMID: 32931580
Molecular Electrical Properties from Quantum Monte Carlo Calculations: Application to Ethyne.
Coccia E, Chernomor O, Barborini M, Sorella S, Guidoni L. Coccia E, et al. Among authors: chernomor o. J Chem Theory Comput. 2012 Jun 12;8(6):1952-62. doi: 10.1021/ct300171q. Epub 2012 May 4. J Chem Theory Comput. 2012. PMID: 26593830
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