Choi Y - Search Results

1

PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels.

Choi Y, Chan AP. Choi Y, et al. Bioinformatics. 2015 Aug 15;31(16):2745-7. doi: 10.1093/bioinformatics/btv195. Epub 2015 Apr 6. Bioinformatics. 2015. PMID: 25851949 Free PMC article.

2

Predicting the functional effect of amino acid substitutions and indels.

Choi Y, Sims GE, Murphy S, Miller JR, Chan AP. Choi Y, et al. PLoS One. 2012;7(10):e46688. doi: 10.1371/journal.pone.0046688. Epub 2012 Oct 8. PLoS One. 2012. PMID: 23056405 Free PMC article.

3

A maize database resource that captures tissue-specific and subcellular-localized gene expression, via fluorescent tags and confocal imaging (Maize Cell Genomics Database).

Krishnakumar V, Choi Y, Beck E, Wu Q, Luo A, Sylvester A, Jackson D, Chan AP. Krishnakumar V, et al. Among authors: choi y. Plant Cell Physiol. 2015 Jan;56(1):e12. doi: 10.1093/pcp/pcu178. Epub 2014 Nov 27. Plant Cell Physiol. 2015. PMID: 25432973

4

A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii.

Chan AP, Sutton G, DePew J, Krishnakumar R, Choi Y, Huang XZ, Beck E, Harkins DM, Kim M, Lesho EP, Nikolich MP, Fouts DE. Chan AP, et al. Among authors: choi y. Genome Biol. 2015 Jul 21;16(1):143. doi: 10.1186/s13059-015-0701-6. Genome Biol. 2015. PMID: 26195261 Free PMC article.

5

Conserved Genomic Terminals of SARS-CoV-2 as Co-evolving Functional Elements and Potential Therapeutic Targets.

Chan AP, Choi Y, Schork NJ. Chan AP, et al. Among authors: choi y. bioRxiv. 2020 Jul 6:2020.07.06.190207. doi: 10.1101/2020.07.06.190207. Preprint. bioRxiv. 2020. PMID: 32676601 Free PMC article. Updated.

6

AbGRI4, a novel antibiotic resistance island in multiply antibiotic-resistant Acinetobacter baumannii clinical isolates.

Chan AP, Choi Y, Clarke TH, Brinkac LM, White RC, Jacobs MR, Bonomo RA, Adams MD, Fouts DE. Chan AP, et al. Among authors: choi y. J Antimicrob Chemother. 2020 Oct 1;75(10):2760-2768. doi: 10.1093/jac/dkaa266. J Antimicrob Chemother. 2020. PMID: 32681170 Free PMC article.

7

Conserved Genomic Terminals of SARS-CoV-2 as Coevolving Functional Elements and Potential Therapeutic Targets.

Chan AP, Choi Y, Schork NJ. Chan AP, et al. Among authors: choi y. mSphere. 2020 Nov 25;5(6):e00754-20. doi: 10.1128/mSphere.00754-20. mSphere. 2020. PMID: 33239366 Free PMC article.

8

Dominance and Sexual Dimorphism Pervade the Salix purpurea L. Transcriptome.

Carlson CH, Choi Y, Chan AP, Serapiglia MJ, Town CD, Smart LB. Carlson CH, et al. Among authors: choi y. Genome Biol Evol. 2017 Sep 1;9(9):2377-2394. doi: 10.1093/gbe/evx174. Genome Biol Evol. 2017. PMID: 28957462 Free PMC article.

9

Comparison of phasing strategies for whole human genomes.

Choi Y, Chan AP, Kirkness E, Telenti A, Schork NJ. Choi Y, et al. PLoS Genet. 2018 Apr 5;14(4):e1007308. doi: 10.1371/journal.pgen.1007308. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29621242 Free PMC article.

10

HSV-1 clinical isolates with unique in vivo and in vitro phenotypes and insight into genomic differences.

Danaher RJ, Fouts DE, Chan AP, Choi Y, DePew J, McCorrison JM, Nelson KE, Wang C, Miller CS. Danaher RJ, et al. Among authors: choi y. J Neurovirol. 2017 Apr;23(2):171-185. doi: 10.1007/s13365-016-0485-9. Epub 2016 Oct 13. J Neurovirol. 2017. PMID: 27739035

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