Increased expression of genes involved in uptake and degradation of murein tripeptide under nitrogen starvation in Escherichia coli

FEMS Microbiol Lett. 2016 Jul;363(14):fnw136. doi: 10.1093/femsle/fnw136. Epub 2016 May 25.

Abstract

Peptidoglycan (also known as murein) is an important envelope component of bacteria, and its turnover usually takes place at considerable levels during normal growth. Amino sugars and murein tripeptide resulting from murein degradation are used for resynthesis of peptidoglycan or as self-generated nutrients or energy sources for cell growth. PgrR (regulator of peptide glycan recycling; formerly YcjZ) was recently identified as a repressor of several genes participating in uptake and degradation of murein tripeptide. In this study, we identified the ycjG gene involved in murein tripeptide degradation as a new direct target of PgrR. The expression of PgrR-regulated genes including ycjY, mppA, mpaA and ycjG was repressed in the presence of a good nitrogen source, but their expression increased under poor nitrogen conditions. Under nitrogen starvation, the pgrR mutant cells exhibited faster growth than wild-type cells, implying that derepression of genes under the control of PgrR may help cells overcome nitrogen limitation. Therefore, these results suggest that nitrogen starvation induces derepression of PgrR-controlled genes involved in uptake and degradation of murein tripeptide, and this may stimulate the utilization of murein tripeptide as a nitrogen source.

Keywords: gene expression; murein tripeptide; nitrogen starvation; peptidoglycan degradation; posttranscriptional regulation; transcription factor.

MeSH terms

  • DNA-Binding Proteins / metabolism
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / genetics*
  • Escherichia coli Proteins / metabolism*
  • Gene Expression Regulation, Bacterial*
  • Gene Order
  • Genes, Bacterial
  • Metabolic Networks and Pathways
  • Mutation
  • Nitrogen / metabolism*
  • Peptidoglycan / metabolism
  • Proteolysis
  • Transcription Factors / metabolism

Substances

  • DNA-Binding Proteins
  • Escherichia coli Proteins
  • Peptidoglycan
  • PgrR protein, E coli
  • Transcription Factors
  • Nitrogen