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Oxytocin receptors and cholesterol: interaction and regulation.
Gimpl G, Burger K, Politowska E, Ciarkowski J, Fahrenholz F. Gimpl G, et al. Among authors: ciarkowski j. Exp Physiol. 2000 Mar;85 Spec No:41S-49S. doi: 10.1111/j.1469-445x.2000.tb00006.x. Exp Physiol. 2000. PMID: 10795905
Molecular dynamics study of the internal water molecules in vasopressin and oxytocin receptors.
Slusarz MJ, Slusarz R, Ciarkowski J. Slusarz MJ, et al. Among authors: ciarkowski j. Protein Pept Lett. 2009;16(4):342-50. doi: 10.2174/092986609787848072. Protein Pept Lett. 2009. PMID: 19356129
Molecular modelling study of the role of cholesterol in the stimulation of the oxytocin receptor.
Politowska E, Kaźmierkiewicz R, Wiegand V, Fahrenholz F, Ciarkowski J. Politowska E, et al. Among authors: ciarkowski j. Acta Biochim Pol. 2001;48(1):83-93. Acta Biochim Pol. 2001. PMID: 11440186
Molecular docking-based test for affinities of two ligands toward vasopressin and oxytocin receptors.
Slusarz R, Kaźmierkiewicz R, Giełdoń A, Lammek B, Ciarkowski J. Slusarz R, et al. Among authors: ciarkowski j. Acta Biochim Pol. 2001;48(1):131-5. Acta Biochim Pol. 2001. PMID: 11440162
Molecular modeling of the oxytocin receptor/bioligand interactions.
Politowska E, Czaplewski C, Ciarkowski J. Politowska E, et al. Among authors: ciarkowski j. Acta Biochim Pol. 1999;46(3):581-90. Acta Biochim Pol. 1999. PMID: 10698266
Conformational studies of neurohypophyseal hormones analogues with glycoconjugates by NMR spectroscopy.
Lubecka EA, Sikorska E, Marcinkowska A, Ciarkowski J. Lubecka EA, et al. Among authors: ciarkowski j. J Pept Sci. 2014 Jun;20(6):406-14. doi: 10.1002/psc.2628. Epub 2014 Mar 18. J Pept Sci. 2014. PMID: 24644276
Ensemble fits of restrained peptides' conformational equilibria to NMR data. Dependence on force fields: AMBER/8 ff03 versus ECEPP/3.
Ciarkowski J, Łuczak S, Jagieła D, Sikorska E, Wójcik J, Oleszczuk M, Izdebski J. Ciarkowski J, et al. J Mol Graph Model. 2012 Feb;32:67-74. doi: 10.1016/j.jmgm.2011.10.004. Epub 2011 Oct 20. J Mol Graph Model. 2012. PMID: 22079210
We did numbers of fits for both types of the conformational ensembles of 1 and 2 to their NOE- and J-data using a common method i.e. maximum entropy approach (Groth et al, J. ...Hence, at minute entropy contributions, it follows that J does or does not transp …
We did numbers of fits for both types of the conformational ensembles of 1 and 2 to their NOE- and J-data using a common method i.e. …
NMR studies of new arginine vasopressin analogs modified with alpha-2-indanylglycine enantiomers at position 2 bound to sodium dodecyl sulfate micelles.
Lubecka E, Kwiatkowska A, Ciarkowski J, Sikorska E. Lubecka E, et al. Among authors: ciarkowski j. Biophys Chem. 2010 Oct;151(3):139-48. doi: 10.1016/j.bpc.2010.06.002. Epub 2010 Jun 16. Biophys Chem. 2010. PMID: 20598431
Molecular docking-based study of vasopressin analogues modified at positions 2 and 3 with N-methylphenylalanine: influence on receptor-bound conformations and interactions with vasopressin and oxytocin receptors.
Slusarz MJ, Sikorska E, Slusarz R, Ciarkowski J. Slusarz MJ, et al. Among authors: ciarkowski j. J Med Chem. 2006 Apr 20;49(8):2463-9. doi: 10.1021/jm051075m. J Med Chem. 2006. PMID: 16610789
Investigation of mechanism of desmopressin binding in vasopressin V2 receptor versus vasopressin V1a and oxytocin receptors: molecular dynamics simulation of the agonist-bound state in the membrane-aqueous system.
Slusarz MJ, Slusarz R, Ciarkowski J. Slusarz MJ, et al. Among authors: ciarkowski j. Biopolymers. 2006 Apr 5;81(5):321-38. doi: 10.1002/bip.20420. Biopolymers. 2006. PMID: 16333859
.; Ciarkowski, J. Acta Biochim Pol 2004 51, 129-136) as a template. The 1-ns unconstrained molecular dynamics (MD) of receptor-dDAVP complexes immersed in the fully hydrated 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine (POPC) membrane model was conducted in …
.; Ciarkowski, J. Acta Biochim Pol 2004 51, 129-136) as a template. The 1-ns unconstrained molecular dynamics (MD) of receptor …
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