Coort SL - Search Results

1

From SNPs to pathways: Biological interpretation of type 2 diabetes (T2DM) genome wide association study (GWAS) results.

Cirillo E, Kutmon M, Gonzalez Hernandez M, Hooimeijer T, Adriaens ME, Eijssen LMT, Parnell LD, Coort SL, Evelo CT. Cirillo E, et al. Among authors: coort sl. PLoS One. 2018 Apr 4;13(4):e0193515. doi: 10.1371/journal.pone.0193515. eCollection 2018. PLoS One. 2018. PMID: 29617380 Free PMC article.

2

The public road to high-quality curated biological pathways.

Adriaens ME, Jaillard M, Waagmeester A, Coort SL, Pico AR, Evelo CT. Adriaens ME, et al. Among authors: coort sl. Drug Discov Today. 2008 Oct;13(19-20):856-62. doi: 10.1016/j.drudis.2008.06.013. Epub 2008 Aug 27. Drug Discov Today. 2008. PMID: 18652912 Free PMC article. Review.

3

Presenting and exploring biological pathways with PathVisio.

van Iersel MP, Kelder T, Pico AR, Hanspers K, Coort S, Conklin BR, Evelo C. van Iersel MP, et al. BMC Bioinformatics. 2008 Sep 25;9:399. doi: 10.1186/1471-2105-9-399. BMC Bioinformatics. 2008. PMID: 18817533 Free PMC article.

4

Bioinformatics for the NuGO proof of principle study: analysis of gene expression in muscle of ApoE3*Leiden mice on a high-fat diet using PathVisio.

Coort SL, van Iersel MP, van Erk M, Kooistra T, Kleemann R, Evelo CT. Coort SL, et al. Genes Nutr. 2008 Dec;3(3-4):185-91. doi: 10.1007/s12263-008-0100-7. Epub 2008 Nov 26. Genes Nutr. 2008. PMID: 19034557 Free PMC article.

5

Pathway enrichment based on text mining and its validation on carotenoid and vitamin A metabolism.

Waagmeester A, Pezik P, Coort S, Tourniaire F, Evelo C, Rebholz-Schuhmann D. Waagmeester A, et al. OMICS. 2009 Oct;13(5):367-79. doi: 10.1089/omi.2009.0029. OMICS. 2009. PMID: 19715393

6

Four selenoproteins, protein biosynthesis, and Wnt signalling are particularly sensitive to limited selenium intake in mouse colon.

Kipp A, Banning A, van Schothorst EM, Méplan C, Schomburg L, Evelo C, Coort S, Gaj S, Keijer J, Hesketh J, Brigelius-Flohé R. Kipp A, et al. Mol Nutr Food Res. 2009 Dec;53(12):1561-72. doi: 10.1002/mnfr.200900105. Mol Nutr Food Res. 2009. PMID: 19810021

7

2D-electrophoresis and multiplex immunoassay proteomic analysis of different body fluids and cellular components reveal known and novel markers for extended fasting.

Bouwman FG, de Roos B, Rubio-Aliaga I, Crosley LK, Duthie SJ, Mayer C, Horgan G, Polley AC, Heim C, Coort SL, Evelo CT, Mulholland F, Johnson IT, Elliott RM, Daniel H, Mariman EC. Bouwman FG, et al. Among authors: coort sl. BMC Med Genomics. 2011 Mar 25;4:24. doi: 10.1186/1755-8794-4-24. BMC Med Genomics. 2011. PMID: 21439033 Free PMC article.

8

Marginal selenium deficiency down-regulates inflammation-related genes in splenic leukocytes of the mouse.

Kipp AP, Banning A, van Schothorst EM, Méplan C, Coort SL, Evelo CT, Keijer J, Hesketh J, Brigelius-Flohé R. Kipp AP, et al. Among authors: coort sl. J Nutr Biochem. 2012 Sep;23(9):1170-7. doi: 10.1016/j.jnutbio.2011.06.011. Epub 2011 Dec 1. J Nutr Biochem. 2012. PMID: 22137268

9

CyTargetLinker: a cytoscape app to integrate regulatory interactions in network analysis.

Kutmon M, Kelder T, Mandaviya P, Evelo CT, Coort SL. Kutmon M, et al. Among authors: coort sl. PLoS One. 2013 Dec 5;8(12):e82160. doi: 10.1371/journal.pone.0082160. eCollection 2013. PLoS One. 2013. PMID: 24340000 Free PMC article.

10

A network biology workflow to study transcriptomics data of the diabetic liver.

Kutmon M, Evelo CT, Coort SL. Kutmon M, et al. Among authors: coort sl. BMC Genomics. 2014 Nov 15;15(1):971. doi: 10.1186/1471-2164-15-971. BMC Genomics. 2014. PMID: 25399255 Free PMC article.

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