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Browsing protein families via the 'Rich Family Description' format.
Corpet F, Gouzy J, Kahn D. Corpet F, et al. Bioinformatics. 1999 Dec;15(12):1020-7. doi: 10.1093/bioinformatics/15.12.1020. Bioinformatics. 1999. PMID: 10745992
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Apweiler R, Attwood TK, Bairoch A, Bateman A, Birney E, Biswas M, Bucher P, Cerutti L, Corpet F, Croning MD, Durbin R, Falquet L, Fleischmann W, Gouzy J, Hermjakob H, Hulo N, Jonassen I, Kahn D, Kanapin A, Karavidopoulou Y, Lopez R, Marx B, Mulder NJ, Oinn TM, Pagni M, Servant F, Sigrist CJ, Zdobnov EM. Apweiler R, et al. Among authors: corpet f. Nucleic Acids Res. 2001 Jan 1;29(1):37-40. doi: 10.1093/nar/29.1.37. Nucleic Acids Res. 2001. PMID: 11125043 Free PMC article.
InterPro--an integrated documentation resource for protein families, domains and functional sites.
Apweiler R, Attwood TK, Bairoch A, Bateman A, Birney E, Biswas M, Bucher P, Cerutti L, Corpet F, Croning MD, Durbin R, Falquet L, Fleischmann W, Gouzy J, Hermjakob H, Hulo N, Jonassen I, Kahn D, Kanapin A, Karavidopoulou Y, Lopez R, Marx B, Mulder NJ, Oinn TM, Pagni M, Servant F, Sigrist CJ, Zdobnov EM; InterPro Consortium. Apweiler R, et al. Among authors: corpet f. Bioinformatics. 2000 Dec;16(12):1145-50. doi: 10.1093/bioinformatics/16.12.1145. Bioinformatics. 2000. PMID: 11159333
RNAlign program: alignment of RNA sequences using both primary and secondary structures.
Corpet F, Michot B. Corpet F, et al. Comput Appl Biosci. 1994 Jul;10(4):389-99. doi: 10.1093/bioinformatics/10.4.389. Comput Appl Biosci. 1994. PMID: 7528630
ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons.
Corpet F, Servant F, Gouzy J, Kahn D. Corpet F, et al. Nucleic Acids Res. 2000 Jan 1;28(1):267-9. doi: 10.1093/nar/28.1.267. Nucleic Acids Res. 2000. PMID: 10592243 Free PMC article.
Recent improvements of the ProDom database of protein domain families.
Corpet F, Gouzy J, Kahn D. Corpet F, et al. Nucleic Acids Res. 1999 Jan 1;27(1):263-7. doi: 10.1093/nar/27.1.263. Nucleic Acids Res. 1999. PMID: 9847197 Free PMC article.
XDOM, a graphical tool to analyse domain arrangements in any set of protein sequences.
Gouzy J, Eugéne P, Greene EA, Kahn D, Corpet F. Gouzy J, et al. Among authors: corpet f. Comput Appl Biosci. 1997 Dec;13(6):601-8. doi: 10.1093/bioinformatics/13.6.601. Comput Appl Biosci. 1997. PMID: 9475988
The ProDom database of protein domain families.
Corpet F, Gouzy J, Kahn D. Corpet F, et al. Nucleic Acids Res. 1998 Jan 1;26(1):323-6. doi: 10.1093/nar/26.1.323. Nucleic Acids Res. 1998. PMID: 9399865 Free PMC article.
Multiple sequence alignment with hierarchical clustering.
Corpet F. Corpet F. Nucleic Acids Res. 1988 Nov 25;16(22):10881-90. doi: 10.1093/nar/16.22.10881. Nucleic Acids Res. 1988. PMID: 2849754 Free PMC article.
Graphical interface for ProDom domain families.
Gouzy J, Corpet F, Kahn D. Gouzy J, et al. Among authors: corpet f. Trends Biochem Sci. 1996 Dec;21(12):493. doi: 10.1016/s0968-0004(96)30040-6. Trends Biochem Sci. 1996. PMID: 9009835 No abstract available.
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