Cournia Z - Search Results

1

Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory.

Cournia Z, Allen TW, Andricioaei I, Antonny B, Baum D, Brannigan G, Buchete NV, Deckman JT, Delemotte L, Del Val C, Friedman R, Gkeka P, Hege HC, Hénin J, Kasimova MA, Kolocouris A, Klein ML, Khalid S, Lemieux MJ, Lindow N, Roy M, Selent J, Tarek M, Tofoleanu F, Vanni S, Urban S, Wales DJ, Smith JC, Bondar AN. Cournia Z, et al. J Membr Biol. 2015 Aug;248(4):611-40. doi: 10.1007/s00232-015-9802-0. Epub 2015 Jun 11. J Membr Biol. 2015. PMID: 26063070 Free PMC article. Review.

2

A molecular mechanics force field for biologically important sterols.

Cournia Z, Smith JC, Ullmann GM. Cournia Z, et al. J Comput Chem. 2005 Oct;26(13):1383-99. doi: 10.1002/jcc.20277. J Comput Chem. 2005. PMID: 16028234

3

Differential effects of cholesterol, ergosterol and lanosterol on a dipalmitoyl phosphatidylcholine membrane: a molecular dynamics simulation study.

Cournia Z, Ullmann GM, Smith JC. Cournia Z, et al. J Phys Chem B. 2007 Feb 22;111(7):1786-801. doi: 10.1021/jp065172i. Epub 2007 Jan 30. J Phys Chem B. 2007. PMID: 17261058

4

Exploring a non-ATP pocket for potential allosteric modulation of PI3Kα.

Gkeka P, Papafotika A, Christoforidis S, Cournia Z. Gkeka P, et al. Among authors: cournia z. J Phys Chem B. 2015 Jan 22;119(3):1002-16. doi: 10.1021/jp506423e. Epub 2014 Dec 3. J Phys Chem B. 2015. PMID: 25299356

5

Investigating the structure and dynamics of the PIK3CA wild-type and H1047R oncogenic mutant.

Gkeka P, Evangelidis T, Pavlaki M, Lazani V, Christoforidis S, Agianian B, Cournia Z. Gkeka P, et al. Among authors: cournia z. PLoS Comput Biol. 2014 Oct 23;10(10):e1003895. doi: 10.1371/journal.pcbi.1003895. eCollection 2014 Oct. PLoS Comput Biol. 2014. PMID: 25340423 Free PMC article.

6

Membrane partitioning of anionic, ligand-coated nanoparticles is accompanied by ligand snorkeling, local disordering, and cholesterol depletion.

Gkeka P, Angelikopoulos P, Sarkisov L, Cournia Z. Gkeka P, et al. Among authors: cournia z. PLoS Comput Biol. 2014 Dec 4;10(12):e1003917. doi: 10.1371/journal.pcbi.1003917. eCollection 2014 Dec. PLoS Comput Biol. 2014. PMID: 25474252 Free PMC article.

7

Free Energy Calculations Reveal the Origin of Binding Preference for Aminoadamantane Blockers of Influenza A/M2TM Pore.

Gkeka P, Eleftheratos S, Kolocouris A, Cournia Z. Gkeka P, et al. Among authors: cournia z. J Chem Theory Comput. 2013 Feb 12;9(2):1272-81. doi: 10.1021/ct300899n. Epub 2013 Jan 3. J Chem Theory Comput. 2013. PMID: 26588768

8

Alchemical Free Energy Calculations and Isothermal Titration Calorimetry Measurements of Aminoadamantanes Bound to the Closed State of Influenza A/M2TM.

Ioannidis H, Drakopoulos A, Tzitzoglaki C, Homeyer N, Kolarov F, Gkeka P, Freudenberger K, Liolios C, Gauglitz G, Cournia Z, Gohlke H, Kolocouris A. Ioannidis H, et al. Among authors: cournia z. J Chem Inf Model. 2016 May 23;56(5):862-76. doi: 10.1021/acs.jcim.6b00079. Epub 2016 May 9. J Chem Inf Model. 2016. PMID: 27105206

9

DPPC-cholesterol phase diagram using coarse-grained Molecular Dynamics simulations.

Wang Y, Gkeka P, Fuchs JE, Liedl KR, Cournia Z. Wang Y, et al. Among authors: cournia z. Biochim Biophys Acta. 2016 Nov;1858(11):2846-2857. doi: 10.1016/j.bbamem.2016.08.005. Epub 2016 Aug 13. Biochim Biophys Acta. 2016. PMID: 27526680 Free article.

10

Self-assembly of anionic, ligand-coated nanoparticles in lipid membranes.

Angelikopoulos P, Sarkisov L, Cournia Z, Gkeka P. Angelikopoulos P, et al. Among authors: cournia z. Nanoscale. 2017 Jan 19;9(3):1040-1048. doi: 10.1039/c6nr05853a. Nanoscale. 2017. PMID: 27740657

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