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Analysis of the mouse liver proteome using advanced mass spectrometry.
Shi R, Kumar C, Zougman A, Zhang Y, Podtelejnikov A, Cox J, Wiśniewski JR, Mann M. Shi R, et al. Among authors: cox j. J Proteome Res. 2007 Aug;6(8):2963-72. doi: 10.1021/pr0605668. Epub 2007 Jul 3. J Proteome Res. 2007. PMID: 17608399
Is proteomics the new genomics?
Cox J, Mann M. Cox J, et al. Cell. 2007 Aug 10;130(3):395-8. doi: 10.1016/j.cell.2007.07.032. Cell. 2007. PMID: 17693247 Review.
Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins.
Graumann J, Hubner NC, Kim JB, Ko K, Moser M, Kumar C, Cox J, Schöler H, Mann M. Graumann J, et al. Among authors: cox j. Mol Cell Proteomics. 2008 Apr;7(4):672-83. doi: 10.1074/mcp.M700460-MCP200. Epub 2007 Nov 28. Mol Cell Proteomics. 2008. PMID: 18045802
A novel chromatographic method allows on-line reanalysis of the proteome.
Waanders LF, Almeida R, Prosser S, Cox J, Eikel D, Allen MH, Schultz GA, Mann M. Waanders LF, et al. Among authors: cox j. Mol Cell Proteomics. 2008 Aug;7(8):1452-9. doi: 10.1074/mcp.M800141-MCP200. Epub 2008 Apr 29. Mol Cell Proteomics. 2008. PMID: 18448420 Free PMC article.
Iodoacetamide-induced artifact mimics ubiquitination in mass spectrometry.
Nielsen ML, Vermeulen M, Bonaldi T, Cox J, Moroder L, Mann M. Nielsen ML, et al. Among authors: cox j. Nat Methods. 2008 Jun;5(6):459-60. doi: 10.1038/nmeth0608-459. Nat Methods. 2008. PMID: 18511913 No abstract available.
How much peptide sequence information is contained in ion trap tandem mass spectra?
Cox J, Hubner NC, Mann M. Cox J, et al. J Am Soc Mass Spectrom. 2008 Dec;19(12):1813-20. doi: 10.1016/j.jasms.2008.07.024. Epub 2008 Aug 7. J Am Soc Mass Spectrom. 2008. PMID: 18757209
Combined use of RNAi and quantitative proteomics to study gene function in Drosophila.
Bonaldi T, Straub T, Cox J, Kumar C, Becker PB, Mann M. Bonaldi T, et al. Among authors: cox j. Mol Cell. 2008 Sep 5;31(5):762-72. doi: 10.1016/j.molcel.2008.07.018. Mol Cell. 2008. PMID: 18775334
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast.
de Godoy LM, Olsen JV, Cox J, Nielsen ML, Hubner NC, Fröhlich F, Walther TC, Mann M. de Godoy LM, et al. Among authors: cox j. Nature. 2008 Oct 30;455(7217):1251-4. doi: 10.1038/nature07341. Epub 2008 Sep 28. Nature. 2008. PMID: 18820680
Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry.
Zanivan S, Gnad F, Wickström SA, Geiger T, Macek B, Cox J, Fässler R, Mann M. Zanivan S, et al. Among authors: cox j. J Proteome Res. 2008 Dec;7(12):5314-26. doi: 10.1021/pr800599n. J Proteome Res. 2008. PMID: 19367708
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