Cox J - Search Results

1

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics.

Tyanova S, Temu T, Cox J. Tyanova S, et al. Among authors: cox j. Nat Protoc. 2016 Dec;11(12):2301-2319. doi: 10.1038/nprot.2016.136. Epub 2016 Oct 27. Nat Protoc. 2016. PMID: 27809316

2

Super-SILAC mix for quantitative proteomics of human tumor tissue.

Geiger T, Cox J, Ostasiewicz P, Wisniewski JR, Mann M. Geiger T, et al. Among authors: cox j. Nat Methods. 2010 May;7(5):383-5. doi: 10.1038/nmeth.1446. Epub 2010 Apr 4. Nat Methods. 2010. PMID: 20364148

3

Proteomics on an Orbitrap benchtop mass spectrometer using all-ion fragmentation.

Geiger T, Cox J, Mann M. Geiger T, et al. Among authors: cox j. Mol Cell Proteomics. 2010 Oct;9(10):2252-61. doi: 10.1074/mcp.M110.001537. Epub 2010 Jul 7. Mol Cell Proteomics. 2010. PMID: 20610777 Free PMC article.

4

Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics.

Geiger T, Wisniewski JR, Cox J, Zanivan S, Kruger M, Ishihama Y, Mann M. Geiger T, et al. Among authors: cox j. Nat Protoc. 2011 Feb;6(2):147-57. doi: 10.1038/nprot.2010.192. Nat Protoc. 2011. PMID: 21293456

5

More than 100,000 detectable peptide species elute in single shotgun proteomics runs but the majority is inaccessible to data-dependent LC-MS/MS.

Michalski A, Cox J, Mann M. Michalski A, et al. Among authors: cox j. J Proteome Res. 2011 Apr 1;10(4):1785-93. doi: 10.1021/pr101060v. Epub 2011 Feb 28. J Proteome Res. 2011. PMID: 21309581

6

Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer.

Michalski A, Damoc E, Hauschild JP, Lange O, Wieghaus A, Makarov A, Nagaraj N, Cox J, Mann M, Horning S. Michalski A, et al. Among authors: cox j. Mol Cell Proteomics. 2011 Sep;10(9):M111.011015. doi: 10.1074/mcp.M111.011015. Epub 2011 Jun 3. Mol Cell Proteomics. 2011. PMID: 21642640 Free PMC article.

7

Analysis of high accuracy, quantitative proteomics data in the MaxQB database.

Schaab C, Geiger T, Stoehr G, Cox J, Mann M. Schaab C, et al. Among authors: cox j. Mol Cell Proteomics. 2012 Mar;11(3):M111.014068. doi: 10.1074/mcp.M111.014068. Epub 2012 Feb 2. Mol Cell Proteomics. 2012. PMID: 22301388 Free PMC article.

8

Cell-type-resolved quantitative proteomics of murine liver.

Azimifar SB, Nagaraj N, Cox J, Mann M. Azimifar SB, et al. Among authors: cox j. Cell Metab. 2014 Dec 2;20(6):1076-87. doi: 10.1016/j.cmet.2014.11.002. Cell Metab. 2014. PMID: 25470552 Free article.

9

Visualization of LC-MS/MS proteomics data in MaxQuant.

Tyanova S, Temu T, Carlson A, Sinitcyn P, Mann M, Cox J. Tyanova S, et al. Among authors: cox j. Proteomics. 2015 Apr;15(8):1453-6. doi: 10.1002/pmic.201400449. Epub 2015 Mar 5. Proteomics. 2015. PMID: 25644178 Free PMC article.

10

The Impact II, a Very High-Resolution Quadrupole Time-of-Flight Instrument (QTOF) for Deep Shotgun Proteomics.

Beck S, Michalski A, Raether O, Lubeck M, Kaspar S, Goedecke N, Baessmann C, Hornburg D, Meier F, Paron I, Kulak NA, Cox J, Mann M. Beck S, et al. Among authors: cox j. Mol Cell Proteomics. 2015 Jul;14(7):2014-29. doi: 10.1074/mcp.M114.047407. Epub 2015 May 19. Mol Cell Proteomics. 2015. PMID: 25991688 Free PMC article.

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