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Predicting base editing outcomes using position-specific sequence determinants.
Pallaseni A, Peets EM, Koeppel J, Weller J, Vanderstichele T, Ho UL, Crepaldi L, van Leeuwen J, Allen F, Parts L. Pallaseni A, et al. Among authors: crepaldi l. Nucleic Acids Res. 2022 Apr 8;50(6):3551-3564. doi: 10.1093/nar/gkac161. Nucleic Acids Res. 2022. PMID: 35286377 Free PMC article.
Predicting the mutations generated by repair of Cas9-induced double-strand breaks.
Allen F, Crepaldi L, Alsinet C, Strong AJ, Kleshchevnikov V, De Angeli P, Páleníková P, Khodak A, Kiselev V, Kosicki M, Bassett AR, Harding H, Galanty Y, Muñoz-Martínez F, Metzakopian E, Jackson SP, Parts L. Allen F, et al. Among authors: crepaldi l. Nat Biotechnol. 2018 Nov 27:10.1038/nbt.4317. doi: 10.1038/nbt.4317. Online ahead of print. Nat Biotechnol. 2018. PMID: 30480667 Free PMC article.
Optimized whole-genome CRISPR interference screens identify ARID1A-dependent growth regulators in human induced pluripotent stem cells.
Usluer S, Hallast P, Crepaldi L, Zhou Y, Urgo K, Dincer C, Su J, Noell G, Alasoo K, El Garwany O, Gerety SS, Newman B, Dovey OM, Parts L. Usluer S, et al. Among authors: crepaldi l. Stem Cell Reports. 2023 May 9;18(5):1061-1074. doi: 10.1016/j.stemcr.2023.03.008. Epub 2023 Apr 6. Stem Cell Reports. 2023. PMID: 37028423 Free PMC article.
P2Y2-P2X7 receptors cross-talk in primed mesenteric endothelial cells upregulates NF-κB signaling favoring mononuclear cell adhesion in schistosomiasis.
Oliveira NF, Monteiro MMLV, Mainieri NS, Tamura AS, Pereira LM, Crepaldi LD, Coutinho-Silva R, Savio LEB, Silva CLM. Oliveira NF, et al. Among authors: crepaldi ld. Front Immunol. 2024 Jan 4;14:1328897. doi: 10.3389/fimmu.2023.1328897. eCollection 2023. Front Immunol. 2024. PMID: 38239348 Free PMC article.
The Role of Interferon Receptors α/β/γ Ablation During Western Diet-Induced Obesity and Insulin Resistance in the Inflectional Model AG129 Mice Strain.
Costa-Bartuli E, Rodrigues AT, Bastos SAR, Kistenmacker N, Crepaldi L, Takiya CM, Zancan P, Gomes FM, Sola-Penna M. Costa-Bartuli E, et al. Among authors: crepaldi l. J Interferon Cytokine Res. 2023 Jul;43(7):287-298. doi: 10.1089/jir.2023.0047. Epub 2023 Jul 10. J Interferon Cytokine Res. 2023. PMID: 37428556
Reframing gene essentiality in terms of adaptive flexibility.
Guzmán GI, Olson CA, Hefner Y, Phaneuf PV, Catoiu E, Crepaldi LB, Micas LG, Palsson BO, Feist AM. Guzmán GI, et al. Among authors: crepaldi lb. BMC Syst Biol. 2018 Dec 17;12(1):143. doi: 10.1186/s12918-018-0653-z. BMC Syst Biol. 2018. PMID: 30558585 Free PMC article.
Enhancer SINEs Link Pol III to Pol II Transcription in Neurons.
Policarpi C, Crepaldi L, Brookes E, Nitarska J, French SM, Coatti A, Riccio A. Policarpi C, et al. Among authors: crepaldi l. Cell Rep. 2017 Dec 5;21(10):2879-2894. doi: 10.1016/j.celrep.2017.11.019. Cell Rep. 2017. PMID: 29212033 Free PMC article.
55 results