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29 results
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ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps.
Croll TI. Croll TI. Acta Crystallogr D Struct Biol. 2018 Jun 1;74(Pt 6):519-530. doi: 10.1107/S2059798318002425. Epub 2018 Apr 11. Acta Crystallogr D Struct Biol. 2018. PMID: 29872003 Free PMC article.
Re-evaluation of low-resolution crystal structures via interactive molecular-dynamics flexible fitting (iMDFF): a case study in complement C4.
Croll TI, Andersen GR. Croll TI, et al. Acta Crystallogr D Struct Biol. 2016 Sep;72(Pt 9):1006-16. doi: 10.1107/S2059798316012201. Epub 2016 Aug 18. Acta Crystallogr D Struct Biol. 2016. PMID: 27599733
Automating tasks in protein structure determination with the clipper python module.
McNicholas S, Croll T, Burnley T, Palmer CM, Hoh SW, Jenkins HT, Dodson E, Cowtan K, Agirre J. McNicholas S, et al. Protein Sci. 2018 Jan;27(1):207-216. doi: 10.1002/pro.3299. Epub 2017 Nov 6. Protein Sci. 2018. PMID: 28901669 Free PMC article.
The rate of cis-trans conformation errors is increasing in low-resolution crystal structures.
Croll TI. Croll TI. Acta Crystallogr D Biol Crystallogr. 2015 Mar;71(Pt 3):706-9. doi: 10.1107/S1399004715000826. Epub 2015 Feb 26. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 25760617
Improved Model of Proton Pump Crystal Structure Obtained by Interactive Molecular Dynamics Flexible Fitting Expands the Mechanistic Model for Proton Translocation in P-Type ATPases.
Focht D, Croll TI, Pedersen BP, Nissen P. Focht D, et al. Among authors: croll ti. Front Physiol. 2017 Apr 11;8:202. doi: 10.3389/fphys.2017.00202. eCollection 2017. Front Physiol. 2017. PMID: 28443028 Free PMC article.
Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling.
Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carroll A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B. Ve T, et al. Nat Struct Mol Biol. 2017 Sep;24(9):743-751. doi: 10.1038/nsmb.3444. Epub 2017 Jul 31. Nat Struct Mol Biol. 2017. PMID: 28759049
A peptidomimetic inhibitor of matrix metalloproteinases containing a tetherable linker group.
Cao Y, Croll TI, Rizzi SC, Shooter GK, Edwards H, Finlayson K, Upton Z, Dargaville TR. Cao Y, et al. Among authors: croll ti. J Biomed Mater Res A. 2011 Mar 15;96(4):663-72. doi: 10.1002/jbm.a.33027. Epub 2011 Jan 25. J Biomed Mater Res A. 2011. PMID: 21268242
Transglutaminases and receptor tyrosine kinases.
Sivaramakrishnan M, Shooter GK, Upton Z, Croll TI. Sivaramakrishnan M, et al. Among authors: croll ti. Amino Acids. 2013 Jan;44(1):19-24. doi: 10.1007/s00726-011-1113-x. Epub 2011 Oct 11. Amino Acids. 2013. PMID: 21986960 Review.
Lysine residues of IGF-I are substrates for transglutaminases and modulate downstream IGF-I signalling.
Sivaramakrishnan M, Croll TI, Gupta R, Stupar D, Van Lonkhuyzen DR, Upton Z, Shooter GK. Sivaramakrishnan M, et al. Among authors: croll ti. Biochim Biophys Acta. 2013 Dec;1833(12):3176-3185. doi: 10.1016/j.bbamcr.2013.09.002. Epub 2013 Sep 11. Biochim Biophys Acta. 2013. PMID: 24036101
Higher-Resolution Structure of the Human Insulin Receptor Ectodomain: Multi-Modal Inclusion of the Insert Domain.
Croll TI, Smith BJ, Margetts MB, Whittaker J, Weiss MA, Ward CW, Lawrence MC. Croll TI, et al. Structure. 2016 Mar 1;24(3):469-76. doi: 10.1016/j.str.2015.12.014. Epub 2016 Feb 12. Structure. 2016. PMID: 26853939 Free PMC article.
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