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Approaches to microRNA discovery.
Berezikov E, Cuppen E, Plasterk RH. Berezikov E, et al. Among authors: cuppen e. Nat Genet. 2006 Jun;38 Suppl:S2-7. doi: 10.1038/ng1794. Nat Genet. 2006. PMID: 16736019 Review.
Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis.
Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E. Berezikov E, et al. Among authors: cuppen e. Genome Res. 2006 Oct;16(10):1289-98. doi: 10.1101/gr.5159906. Epub 2006 Sep 5. Genome Res. 2006. PMID: 16954537 Free PMC article.
Mouse microRNA profiles determined with a new and sensitive cloning method.
Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H. Takada S, et al. Among authors: cuppen e. Nucleic Acids Res. 2006;34(17):e115. doi: 10.1093/nar/gkl653. Epub 2006 Sep 14. Nucleic Acids Res. 2006. PMID: 16973894 Free PMC article.
Mammalian mirtron genes.
Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC. Berezikov E, et al. Among authors: cuppen e. Mol Cell. 2007 Oct 26;28(2):328-36. doi: 10.1016/j.molcel.2007.09.028. Mol Cell. 2007. PMID: 17964270 Free PMC article.
miRNAs: small changes, widespread effects.
Linsen SE, Tops BB, Cuppen E. Linsen SE, et al. Among authors: cuppen e. Cell Res. 2008 Dec;18(12):1157-9. doi: 10.1038/cr.2008.311. Cell Res. 2008. PMID: 19043436 No abstract available.
Genome sequencing reveals loci under artificial selection that underlie disease phenotypes in the laboratory rat.
Atanur SS, Diaz AG, Maratou K, Sarkis A, Rotival M, Game L, Tschannen MR, Kaisaki PJ, Otto GW, Ma MC, Keane TM, Hummel O, Saar K, Chen W, Guryev V, Gopalakrishnan K, Garrett MR, Joe B, Citterio L, Bianchi G, McBride M, Dominiczak A, Adams DJ, Serikawa T, Flicek P, Cuppen E, Hubner N, Petretto E, Gauguier D, Kwitek A, Jacob H, Aitman TJ. Atanur SS, et al. Among authors: cuppen e. Cell. 2013 Aug 1;154(3):691-703. doi: 10.1016/j.cell.2013.06.040. Epub 2013 Jul 25. Cell. 2013. PMID: 23890820 Free PMC article.
Identification of multipotent luminal progenitor cells in human prostate organoid cultures.
Karthaus WR, Iaquinta PJ, Drost J, Gracanin A, van Boxtel R, Wongvipat J, Dowling CM, Gao D, Begthel H, Sachs N, Vries RGJ, Cuppen E, Chen Y, Sawyers CL, Clevers HC. Karthaus WR, et al. Among authors: cuppen e. Cell. 2014 Sep 25;159(1):163-175. doi: 10.1016/j.cell.2014.08.017. Epub 2014 Sep 4. Cell. 2014. PMID: 25201529 Free PMC article.
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