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EggLib: processing, analysis and simulation tools for population genetics and genomics.
De Mita S, Siol M. De Mita S, et al. BMC Genet. 2012 Apr 11;13:27. doi: 10.1186/1471-2156-13-27. BMC Genet. 2012. PMID: 22494792 Free PMC article.
Investigation of the demographic and selective forces shaping the nucleotide diversity of genes involved in nod factor signaling in Medicago truncatula.
De Mita S, Ronfort J, McKhann HI, Poncet C, El Malki R, Bataillon T. De Mita S, et al. Genetics. 2007 Dec;177(4):2123-33. doi: 10.1534/genetics.107.076943. Genetics. 2007. PMID: 18073426 Free PMC article.
Adaptive evolution of the symbiotic gene NORK is not correlated with shifts of rhizobial specificity in the genus Medicago.
De Mita S, Santoni S, Ronfort J, Bataillon T. De Mita S, et al. BMC Evol Biol. 2007 Nov 6;7:210. doi: 10.1186/1471-2148-7-210. BMC Evol Biol. 2007. PMID: 17986323 Free PMC article.
Contrasted patterns of selective pressure in three recent paralogous gene pairs in the Medicago genus (L.).
Ho-Huu J, Ronfort J, De Mita S, Bataillon T, Hochu I, Weber A, Chantret N. Ho-Huu J, et al. Among authors: de mita s. BMC Evol Biol. 2012 Oct 1;12:195. doi: 10.1186/1471-2148-12-195. BMC Evol Biol. 2012. PMID: 23025552 Free PMC article.
Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations.
De Mita S, Thuillet AC, Gay L, Ahmadi N, Manel S, Ronfort J, Vigouroux Y. De Mita S, et al. Mol Ecol. 2013 Mar;22(5):1383-99. doi: 10.1111/mec.12182. Epub 2013 Jan 7. Mol Ecol. 2013. PMID: 23294205
Evolutionary history of pearl millet (Pennisetum glaucum [L.] R. Br.) and selection on flowering genes since its domestication.
Clotault J, Thuillet AC, Buiron M, De Mita S, Couderc M, Haussmann BI, Mariac C, Vigouroux Y. Clotault J, et al. Among authors: de mita s. Mol Biol Evol. 2012 Apr;29(4):1199-212. doi: 10.1093/molbev/msr287. Epub 2011 Nov 22. Mol Biol Evol. 2012. PMID: 22114357
Molecular adaptation in flowering and symbiotic recognition pathways: insights from patterns of polymorphism in the legume Medicago truncatula.
De Mita S, Chantret N, Loridon K, Ronfort J, Bataillon T. De Mita S, et al. BMC Evol Biol. 2011 Aug 1;11:229. doi: 10.1186/1471-2148-11-229. BMC Evol Biol. 2011. PMID: 21806823 Free PMC article.
Amount of information needed for model choice in Approximate Bayesian Computation.
Stocks M, Siol M, Lascoux M, De Mita S. Stocks M, et al. Among authors: de mita s. PLoS One. 2014 Jun 24;9(6):e99581. doi: 10.1371/journal.pone.0099581. eCollection 2014. PLoS One. 2014. PMID: 24959900 Free PMC article.
Evolution of a symbiotic receptor through gene duplications in the legume-rhizobium mutualism.
De Mita S, Streng A, Bisseling T, Geurts R. De Mita S, et al. New Phytol. 2014 Feb;201(3):961-72. doi: 10.1111/nph.12549. Epub 2013 Oct 28. New Phytol. 2014. PMID: 24400903 Free article.
A phylogenetic strategy based on a legume-specific whole genome duplication yields symbiotic cytokinin type-A response regulators.
Op den Camp RH, De Mita S, Lillo A, Cao Q, Limpens E, Bisseling T, Geurts R. Op den Camp RH, et al. Among authors: de mita s. Plant Physiol. 2011 Dec;157(4):2013-22. doi: 10.1104/pp.111.187526. Epub 2011 Oct 27. Plant Physiol. 2011. PMID: 22034625 Free PMC article.
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