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Detection of Imprinted Genes by Single-Cell Allele-Specific Gene Expression.
Santoni FA, Stamoulis G, Garieri M, Falconnet E, Ribaux P, Borel C, Antonarakis SE. Santoni FA, et al. Am J Hum Genet. 2017 Mar 2;100(3):444-453. doi: 10.1016/j.ajhg.2017.01.028. Epub 2017 Feb 9. Am J Hum Genet. 2017. PMID: 28190458 Free PMC article.
Standard RNA bulk cell sequencing applied to whole-tissue samples has been used to detect imprinted genes in human and mouse models. ...Our approach allowed us to validate the imprinting status of all of the known imprinted genes e …
Standard RNA bulk cell sequencing applied to whole-tissue samples has been used to detect imprinted genes in hum …
Three-dimensional genome structures of single diploid human cells.
Tan L, Xing D, Chang CH, Li H, Xie XS. Tan L, et al. Science. 2018 Aug 31;361(6405):924-928. doi: 10.1126/science.aat5641. Epub 2018 Aug 30. Science. 2018. PMID: 30166492 Free PMC article.
Three-dimensional genome structures play a key role in gene regulation and cell functions. Characterization of genome structures necessitates single-cell measurements. ...The two alleles of imprinted loci and the two X chromosomes were st …
Three-dimensional genome structures play a key role in gene regulation and cell functions. Characterization of genome structur …
The DNA methylation profile of human spermatogonia at single-cell- and single-allele-resolution refutes its role in spermatogonial stem cell function and germ cell differentiation.
Fend-Guella DL, von Kopylow K, Spiess AN, Schulze W, Salzbrunn A, Diederich S, El Hajj N, Haaf T, Zechner U, Linke M. Fend-Guella DL, et al. Mol Hum Reprod. 2019 Jun 6;25(6):283-294. doi: 10.1093/molehr/gaz017. Mol Hum Reprod. 2019. PMID: 30892608
Both spermatogonial subpopulations exhibited a methylation pattern largely equivalent to sperm, with hypomethylation of hSSC marker and maternally imprinted genes and hypermethylation of pluripotency and paternally imprinted genes. Interestingly, we …
Both spermatogonial subpopulations exhibited a methylation pattern largely equivalent to sperm, with hypomethylation of hSSC marker and mate …
Visualizing allele-specific expression in single cells reveals epigenetic mosaicism in an H19 loss-of-imprinting mutant.
Ginart P, Kalish JM, Jiang CL, Yu AC, Bartolomei MS, Raj A. Ginart P, et al. Genes Dev. 2016 Mar 1;30(5):567-78. doi: 10.1101/gad.275958.115. Genes Dev. 2016. PMID: 26944681 Free PMC article.
Imprinting is a classic mammalian epigenetic phenomenon that results in expression from a single parental allele. Imprinting defects can lead to inappropriate expression from the normally silenced allele, but it remains unclear whether every
Imprinting is a classic mammalian epigenetic phenomenon that results in expression from a single parental allele. Im
A reporter model to visualize imprinting stability at the Dlk1 locus during mouse development and in pluripotent cells.
Swanzey E, Stadtfeld M. Swanzey E, et al. Development. 2016 Nov 15;143(22):4161-4166. doi: 10.1242/dev.138255. Epub 2016 Oct 11. Development. 2016. PMID: 27729406 Free PMC article.
Genomic imprinting results in the monoallelic expression of genes that encode important regulators of growth and proliferation. ...Here, we describe a Dlk1 knock-in reporter mouse that enables single-cell visualization of allele-specific express …
Genomic imprinting results in the monoallelic expression of genes that encode important regulators of growth and proliferation …
Imprinted expression of SNRPN in human preimplantation embryos.
Huntriss J, Daniels R, Bolton V, Monk M. Huntriss J, et al. Am J Hum Genet. 1998 Oct;63(4):1009-14. doi: 10.1086/302039. Am J Hum Genet. 1998. PMID: 9758597 Free PMC article.
To increase our understanding of the regulation of expression of this imprinted gene, we have developed single-cell-sensitive procedures for the analysis of expression of the SNRPN gene during early human development. ...Using embryos heterozygo …
To increase our understanding of the regulation of expression of this imprinted gene, we have developed single-cell
Mosaic analysis with double markers reveals cell-type-specific paternal growth dominance.
Hippenmeyer S, Johnson RL, Luo L. Hippenmeyer S, et al. Cell Rep. 2013 Mar 28;3(3):960-7. doi: 10.1016/j.celrep.2013.02.002. Epub 2013 Feb 28. Cell Rep. 2013. PMID: 23453967 Free PMC article.
Genomic imprinting leads to preferred expression of either the maternal or paternal alleles of a subset of genes. ...However, the functional relevance of imprinting at the cellular level is poorly understood for most imprinted genes. ...
Genomic imprinting leads to preferred expression of either the maternal or paternal alleles of a subset of genes. ...Ho …
Biallelic transcription of Igf2 and H19 in individual cells suggests a post-transcriptional contribution to genomic imprinting.
Jouvenot Y, Poirier F, Jami J, Paldi A. Jouvenot Y, et al. Curr Biol. 1999 Oct 21;9(20):1199-202. doi: 10.1016/S0960-9822(00)80026-3. Curr Biol. 1999. PMID: 10531031 Free article.
The H19 and insulin-like growth factor 2 (Igf2) genes in the mouse are models for genomic imprinting during development. The genes are located only 90 kb apart in the same transcriptional orientation [1], but are reciprocally imprinted: Igf2 is paterna …
The H19 and insulin-like growth factor 2 (Igf2) genes in the mouse are models for genomic imprinting during development. The …