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Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome.
Zupancic ML, Cantarel BL, Liu Z, Drabek EF, Ryan KA, Cirimotich S, Jones C, Knight R, Walters WA, Knights D, Mongodin EF, Horenstein RB, Mitchell BD, Steinle N, Snitker S, Shuldiner AR, Fraser CM. Zupancic ML, et al. Among authors: drabek ef. PLoS One. 2012;7(8):e43052. doi: 10.1371/journal.pone.0043052. Epub 2012 Aug 15. PLoS One. 2012. PMID: 22905200 Free PMC article.
Simultaneous transcriptional profiling of bacteria and their host cells.
Humphrys MS, Creasy T, Sun Y, Shetty AC, Chibucos MC, Drabek EF, Fraser CM, Farooq U, Sengamalay N, Ott S, Shou H, Bavoil PM, Mahurkar A, Myers GS. Humphrys MS, et al. Among authors: drabek ef. PLoS One. 2013 Dec 4;8(12):e80597. doi: 10.1371/journal.pone.0080597. eCollection 2013. PLoS One. 2013. PMID: 24324615 Free PMC article.
Transcriptional attenuation controls macrolide inducible efflux and resistance in Streptococcus pneumoniae and in other Gram-positive bacteria containing mef/mel(msr(D)) elements.
Chancey ST, Bai X, Kumar N, Drabek EF, Daugherty SC, Colon T, Ott S, Sengamalay N, Sadzewicz L, Tallon LJ, Fraser CM, Tettelin H, Stephens DS. Chancey ST, et al. Among authors: drabek ef. PLoS One. 2015 Feb 19;10(2):e0116254. doi: 10.1371/journal.pone.0116254. eCollection 2015. PLoS One. 2015. PMID: 25695510 Free PMC article.
New var reconstruction algorithm exposes high var sequence diversity in a single geographic location in Mali.
Dara A, Drábek EF, Travassos MA, Moser KA, Delcher AL, Su Q, Hostelley T, Coulibaly D, Daou M, Dembele A, Diarra I, Kone AK, Kouriba B, Laurens MB, Niangaly A, Traore K, Tolo Y, Fraser CM, Thera MA, Djimde AA, Doumbo OK, Plowe CV, Silva JC. Dara A, et al. Among authors: drabek ef. Genome Med. 2017 Mar 28;9(1):30. doi: 10.1186/s13073-017-0422-4. Genome Med. 2017. PMID: 28351419 Free PMC article.
Strains used in whole organism Plasmodium falciparum vaccine trials differ in genome structure, sequence, and immunogenic potential.
Moser KA, Drábek EF, Dwivedi A, Stucke EM, Crabtree J, Dara A, Shah Z, Adams M, Li T, Rodrigues PT, Koren S, Phillippy AM, Munro JB, Ouattara A, Sparklin BC, Dunning Hotopp JC, Lyke KE, Sadzewicz L, Tallon LJ, Spring MD, Jongsakul K, Lon C, Saunders DL, Ferreira MU, Nyunt MM, Laufer MK, Travassos MA, Sauerwein RW, Takala-Harrison S, Fraser CM, Sim BKL, Hoffman SL, Plowe CV, Silva JC. Moser KA, et al. Among authors: drabek ef. Genome Med. 2020 Jan 8;12(1):6. doi: 10.1186/s13073-019-0708-9. Genome Med. 2020. PMID: 31915075 Free PMC article.
The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence.
Norling M, Bishop RP, Pelle R, Qi W, Henson S, Drábek EF, Tretina K, Odongo D, Mwaura S, Njoroge T, Bongcam-Rudloff E, Daubenberger CA, Silva JC. Norling M, et al. Among authors: drabek ef. BMC Genomics. 2015 Sep 24;16:729. doi: 10.1186/s12864-015-1910-9. BMC Genomics. 2015. PMID: 26403690 Free PMC article.
16 results