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Protein-RNA recognition.
Draper DE. Draper DE. Annu Rev Biochem. 1995;64:593-620. doi: 10.1146/annurev.bi.64.070195.003113. Annu Rev Biochem. 1995. PMID: 7574494 Review.
On the use of phasing experiments to measure helical repeat and bulge loop-associated twist in RNA.
Tang RS, Draper DE. Tang RS, et al. Among authors: draper de. Nucleic Acids Res. 1994 Mar 11;22(5):835-41. doi: 10.1093/nar/22.5.835. Nucleic Acids Res. 1994. PMID: 7511222 Free PMC article.
The crystal structure of ribosomal protein S4 reveals a two-domain molecule with an extensive RNA-binding surface: one domain shows structural homology to the ETS DNA-binding motif.
Davies C, Gerstner RB, Draper DE, Ramakrishnan V, White SW. Davies C, et al. Among authors: draper de. EMBO J. 1998 Aug 17;17(16):4545-58. doi: 10.1093/emboj/17.16.4545. EMBO J. 1998. PMID: 9707415 Free PMC article.
The solution structure of ribosomal protein S4 delta41 reveals two subdomains and a positively charged surface that may interact with RNA.
Markus MA, Gerstner RB, Draper DE, Torchia DA. Markus MA, et al. Among authors: draper de. EMBO J. 1998 Aug 17;17(16):4559-71. doi: 10.1093/emboj/17.16.4559. EMBO J. 1998. PMID: 9707416 Free PMC article.
High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Markus MA, Hinck AP, Huang S, Draper DE, Torchia DA. Markus MA, et al. Among authors: draper de. Nat Struct Biol. 1997 Jan;4(1):70-7. doi: 10.1038/nsb0197-70. Nat Struct Biol. 1997. PMID: 8989327
The RNA binding domain of ribosomal protein L11 is structurally similar to homeodomains.
Xing Y, Guha Thakurta D, Draper DE. Xing Y, et al. Among authors: draper de. Nat Struct Biol. 1997 Jan;4(1):24-7. doi: 10.1038/nsb0197-24. Nat Struct Biol. 1997. PMID: 8989317
Interaction of thiostrepton with an RNA fragment derived from the plastid-encoded ribosomal RNA of the malaria parasite.
Rogers MJ, Bukhman YV, McCutchan TF, Draper DE. Rogers MJ, et al. Among authors: draper de. RNA. 1997 Aug;3(8):815-20. RNA. 1997. PMID: 9257641 Free PMC article.
The RNA binding domain of ribosomal protein L11: three-dimensional structure of the RNA-bound form of the protein and its interaction with 23 S rRNA.
Hinck AP, Markus MA, Huang S, Grzesiek S, Kustonovich I, Draper DE, Torchia DA. Hinck AP, et al. Among authors: draper de. J Mol Biol. 1997 Nov 21;274(1):101-13. doi: 10.1006/jmbi.1997.1379. J Mol Biol. 1997. PMID: 9398519
Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Stagno JR, Liu Y, Bhandari YR, Conrad CE, Panja S, Swain M, Fan L, Nelson G, Li C, Wendel DR, White TA, Coe JD, Wiedorn MO, Knoska J, Oberthuer D, Tuckey RA, Yu P, Dyba M, Tarasov SG, Weierstall U, Grant TD, Schwieters CD, Zhang J, Ferré-D'Amaré AR, Fromme P, Draper DE, Liang M, Hunter MS, Boutet S, Tan K, Zuo X, Ji X, Barty A, Zatsepin NA, Chapman HN, Spence JC, Woodson SA, Wang YX. Stagno JR, et al. Among authors: draper de. Nature. 2017 Jan 12;541(7636):242-246. doi: 10.1038/nature20599. Epub 2016 Nov 14. Nature. 2017. PMID: 27841871 Free PMC article.
Mg(2+) binding to tRNA revisited: the nonlinear Poisson-Boltzmann model.
Misra VK, Draper DE. Misra VK, et al. Among authors: draper de. J Mol Biol. 2000 Jun 9;299(3):813-25. doi: 10.1006/jmbi.2000.3769. J Mol Biol. 2000. PMID: 10835286
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