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Genomic and functional adaptation in surface ocean planktonic prokaryotes.
Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, Eisenstadt E, Rogers YH, Friedman R, Frazier M, Venter JC. Yooseph S, et al. Among authors: dupont cl. Nature. 2010 Nov 4;468(7320):60-6. doi: 10.1038/nature09530. Nature. 2010. PMID: 21048761
Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton.
Cuvelier ML, Allen AE, Monier A, McCrow JP, Messié M, Tringe SG, Woyke T, Welsh RM, Ishoey T, Lee JH, Binder BJ, DuPont CL, Latasa M, Guigand C, Buck KR, Hilton J, Thiagarajan M, Caler E, Read B, Lasken RS, Chavez FP, Worden AZ. Cuvelier ML, et al. Among authors: dupont cl. Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14679-84. doi: 10.1073/pnas.1001665107. Epub 2010 Jul 28. Proc Natl Acad Sci U S A. 2010. PMID: 20668244 Free PMC article.
Efficient de novo assembly of single-cell bacterial genomes from short-read data sets.
Chitsaz H, Yee-Greenbaum JL, Tesler G, Lombardo MJ, Dupont CL, Badger JH, Novotny M, Rusch DB, Fraser LJ, Gormley NA, Schulz-Trieglaff O, Smith GP, Evers DJ, Pevzner PA, Lasken RS. Chitsaz H, et al. Among authors: dupont cl. Nat Biotechnol. 2011 Sep 18;29(10):915-21. doi: 10.1038/nbt.1966. Nat Biotechnol. 2011. PMID: 21926975 Free PMC article.
Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.
Dupont CL, Rusch DB, Yooseph S, Lombardo MJ, Richter RA, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH, Halpern AL, Lasken RS, Nealson K, Friedman R, Venter JC. Dupont CL, et al. ISME J. 2012 Jun;6(6):1186-99. doi: 10.1038/ismej.2011.189. Epub 2011 Dec 15. ISME J. 2012. PMID: 22170421 Free PMC article.
Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast.
Tagwerker C, Dupont CL, Karas BJ, Ma L, Chuang RY, Benders GA, Ramon A, Novotny M, Montague MG, Venepally P, Brami D, Schwartz A, Andrews-Pfannkoch C, Gibson DG, Glass JI, Smith HO, Venter JC, Hutchison CA 3rd. Tagwerker C, et al. Among authors: dupont cl. Nucleic Acids Res. 2012 Nov 1;40(20):10375-83. doi: 10.1093/nar/gks823. Epub 2012 Aug 31. Nucleic Acids Res. 2012. PMID: 22941652 Free PMC article.
Draft Genome Sequence of a Single Cell of SAR86 Clade Subgroup IIIa.
Rusch DB, Lombardo MJ, Yee-Greenbaum J, Novotny M, Brinkac LM, Lasken RS, Dupont CL. Rusch DB, et al. Among authors: dupont cl. Genome Announc. 2013 Jan;1(1):e00030-12. doi: 10.1128/genomeA.00030-12. Epub 2013 Jan 15. Genome Announc. 2013. PMID: 23405308 Free PMC article.
124 results