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A myovirus encoding both photosystem I and II proteins enhances cyclic electron flow in infected Prochlorococcus cells.
Fridman S, Flores-Uribe J, Larom S, Alalouf O, Liran O, Yacoby I, Salama F, Bailleul B, Rappaport F, Ziv T, Sharon I, Cornejo-Castillo FM, Philosof A, Dupont CL, Sánchez P, Acinas SG, Rohwer FL, Lindell D, Béjà O. Fridman S, et al. Among authors: dupont cl. Nat Microbiol. 2017 Oct;2(10):1350-1357. doi: 10.1038/s41564-017-0002-9. Epub 2017 Aug 7. Nat Microbiol. 2017. PMID: 28785078 Free article.
Closing the gaps on the viral photosystem-I psaDCAB gene organization.
Roitman S, Flores-Uribe J, Philosof A, Knowles B, Rohwer F, Ignacio-Espinoza JC, Sullivan MB, Cornejo-Castillo FM, Sánchez P, Acinas SG, Dupont CL, Béjà O. Roitman S, et al. Among authors: dupont cl. Environ Microbiol. 2015 Dec;17(12):5100-8. doi: 10.1111/1462-2920.13036. Epub 2015 Oct 14. Environ Microbiol. 2015. PMID: 26310718 Free PMC article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):499-509. doi: 10.1038/s41587-020-0718-6. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169036 Free PMC article.
Author Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):521. doi: 10.1038/s41587-021-00898-4. Nat Biotechnol. 2021. PMID: 33795890 Free PMC article. No abstract available.
Publisher Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium; Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2021 Apr;39(4):520. doi: 10.1038/s41587-020-00769-4. Nat Biotechnol. 2021. PMID: 33208936 Free PMC article. No abstract available.
Host-microbiome associations in saliva predict COVID-19 severity.
Alqedari H, Altabtbaei K, Espinoza JL, Bin-Hasan S, Alghounaim M, Alawady A, Altabtabae A, AlJamaan S, Devarajan S, AlShammari T, Ben Eid M, Matsuoka M, Jang H, Dupont CL, Freire M. Alqedari H, et al. Among authors: dupont cl. PNAS Nexus. 2024 Mar 25;3(4):pgae126. doi: 10.1093/pnasnexus/pgae126. eCollection 2024 Apr. PNAS Nexus. 2024. PMID: 38617584 Free PMC article.
Unveiling the Microbial Realm with VEBA 2.0: A modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic, and viral multi-omics from either short- or long-read sequencing.
Espinoza JL, Phillips A, Prentice MB, Tan GS, Kamath PL, Lloyd KG, Dupont CL. Espinoza JL, et al. Among authors: dupont cl. bioRxiv [Preprint]. 2024 Mar 11:2024.03.08.583560. doi: 10.1101/2024.03.08.583560. bioRxiv. 2024. PMID: 38559265 Free PMC article. Preprint.
Efficient formation of single-copy human artificial chromosomes.
Gambogi CW, Birchak GJ, Mer E, Brown DM, Yankson G, Kixmoeller K, Gavade JN, Espinoza JL, Kashyap P, Dupont CL, Logsdon GA, Heun P, Glass JI, Black BE. Gambogi CW, et al. Among authors: dupont cl. Science. 2024 Mar 22;383(6689):1344-1349. doi: 10.1126/science.adj3566. Epub 2024 Mar 21. Science. 2024. PMID: 38513017
120 results