The emergence of HIV/AIDS in the Americas and beyond

Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18566-70. doi: 10.1073/pnas.0705329104. Epub 2007 Oct 31.

Abstract

HIV-1 group M subtype B was the first HIV discovered and is the predominant variant of AIDS virus in most countries outside of sub-Saharan Africa. However, the circumstances of its origin and emergence remain unresolved. Here we propose a geographic sequence and time line for the origin of subtype B and the emergence of pandemic HIV/AIDS out of Africa. Using HIV-1 gene sequences recovered from archival samples from some of the earliest known Haitian AIDS patients, we find that subtype B likely moved from Africa to Haiti in or around 1966 (1962-1970) and then spread there for some years before successfully dispersing elsewhere. A "pandemic" clade, encompassing the vast majority of non-Haitian subtype B infections in the United States and elsewhere around the world, subsequently emerged after a single migration of the virus out of Haiti in or around 1969 (1966-1972). Haiti appears to have the oldest HIV/AIDS epidemic outside sub-Saharan Africa and the most genetically diverse subtype B epidemic, which might present challenges for HIV-1 vaccine design and testing. The emergence of the pandemic variant of subtype B was an important turning point in the history of AIDS, but its spread was likely driven by ecological rather than evolutionary factors. Our results suggest that HIV-1 circulated cryptically in the United States for approximately 12 years before the recognition of AIDS in 1981.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acquired Immunodeficiency Syndrome* / epidemiology
  • Americas
  • DNA, Viral / genetics
  • HIV-1 / classification
  • HIV-1 / genetics*
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Time Factors

Substances

  • DNA, Viral

Associated data

  • GENBANK/EF159970
  • GENBANK/EF159971
  • GENBANK/EF159972
  • GENBANK/EF159973
  • GENBANK/EF159974
  • GENBANK/EF362773
  • GENBANK/EF362774
  • GENBANK/EF362775
  • GENBANK/EF362776
  • GENBANK/EF362777