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15 results

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Page 1
Recounting the FANTOM CAGE-Associated Transcriptome.
Imada EL, Sanchez DF, Collado-Torres L, Wilks C, Matam T, Dinalankara W, Stupnikov A, Lobo-Pereira F, Yip CW, Yasuzawa K, Kondo N, Itoh M, Suzuki H, Kasukawa T, Hon CC, de Hoon MJL, Shin JW, Carninci P, Jaffe AE, Leek JT, Favorov A, Franco GR, Langmead B, Marchionni L. Imada EL, et al. Genome Res. 2020 Jul;30(7):1073-1081. doi: 10.1101/gr.254656.119. Epub 2020 Feb 20. Genome Res. 2020. PMID: 32079618 Free PMC article.
Donor-derived acute myeloid leukemia in solid organ transplantation.
Marchionni L, Lobo FP, Kostadinov R, Serra A, Besso FG, Deaglio S, Stratta P, Berrino M, Zanettini C, Imada EL, Omar MN, Gaidano G, Bruno B, Saglio G, Amoroso A. Marchionni L, et al. Among authors: imada el. Am J Transplant. 2022 Dec;22(12):3111-3119. doi: 10.1111/ajt.17174. Epub 2022 Sep 8. Am J Transplant. 2022. PMID: 35979657 Free PMC article.
Using biological constraints to improve prediction in precision oncology.
Omar M, Dinalankara W, Mulder L, Coady T, Zanettini C, Imada EL, Younes L, Geman D, Marchionni L. Omar M, et al. Among authors: imada el. iScience. 2023 Feb 2;26(3):106108. doi: 10.1016/j.isci.2023.106108. eCollection 2023 Mar 17. iScience. 2023. PMID: 36852282 Free PMC article.
recount3: summaries and queries for large-scale RNA-seq expression and splicing.
Wilks C, Zheng SC, Chen FY, Charles R, Solomon B, Ling JP, Imada EL, Zhang D, Joseph L, Leek JT, Jaffe AE, Nellore A, Collado-Torres L, Hansen KD, Langmead B. Wilks C, et al. Among authors: imada el. Genome Biol. 2021 Nov 29;22(1):323. doi: 10.1186/s13059-021-02533-6. Genome Biol. 2021. PMID: 34844637 Free PMC article.
CALANGO: A phylogeny-aware comparative genomics tool for discovering quantitative genotype-phenotype associations across species.
Hongo JA, de Castro GM, Albuquerque Menezes AP, Rios Picorelli AC, Martins da Silva TT, Imada EL, Marchionni L, Del-Bem LE, Vieira Chaves A, Almeida GMF, Campelo F, Lobo FP. Hongo JA, et al. Among authors: imada el. Patterns (N Y). 2023 Apr 14;4(6):100728. doi: 10.1016/j.patter.2023.100728. eCollection 2023 Jun 9. Patterns (N Y). 2023. PMID: 37409050 Free PMC article.
Hypomethylation, endogenous retrovirus expression, and interferon signaling in testicular germ cell tumors.
Haffner MC, Taheri D, Luidy-Imada E, Palsgrove DN, Eich ML, Netto GJ, Matoso A, Nirschl TR, Zheng Q, Hicks JL, Nelson WG, De Marzo AM, Marchionni L, Drake CG, Yegnasubramanian S. Haffner MC, et al. Among authors: luidy imada e. Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8580-E8582. doi: 10.1073/pnas.1803292115. Epub 2018 Sep 4. Proc Natl Acad Sci U S A. 2018. PMID: 30181298 Free PMC article. No abstract available.
Transcriptional landscape of PTEN loss in primary prostate cancer.
Imada EL, Sanchez DF, Dinalankara W, Vidotto T, Ebot EM, Tyekucheva S, Franco GR, Mucci LA, Loda M, Schaeffer EM, Lotan T, Marchionni L. Imada EL, et al. BMC Cancer. 2021 Jul 26;21(1):856. doi: 10.1186/s12885-021-08593-y. BMC Cancer. 2021. PMID: 34311724 Free PMC article.
15 results