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nhmmer: DNA homology search with profile HMMs.
Wheeler TJ, Eddy SR. Wheeler TJ, et al. Among authors: eddy sr. Bioinformatics. 2013 Oct 1;29(19):2487-9. doi: 10.1093/bioinformatics/btt403. Epub 2013 Jul 9. Bioinformatics. 2013. PMID: 23842809 Free PMC article.
Profile hidden Markov models.
Eddy SR. Eddy SR. Bioinformatics. 1998;14(9):755-63. doi: 10.1093/bioinformatics/14.9.755. Bioinformatics. 1998. PMID: 9918945 Review.
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