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The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Angly FE, Willner D, Prieto-Davó A, Edwards RA, Schmieder R, Vega-Thurber R, Antonopoulos DA, Barott K, Cottrell MT, Desnues C, Dinsdale EA, Furlan M, Haynes M, Henn MR, Hu Y, Kirchman DL, McDole T, McPherson JD, Meyer F, Miller RM, Mundt E, Naviaux RK, Rodriguez-Mueller B, Stevens R, Wegley L, Zhang L, Zhu B, Rohwer F. Angly FE, et al. Among authors: edwards ra. PLoS Comput Biol. 2009 Dec;5(12):e1000593. doi: 10.1371/journal.pcbi.1000593. Epub 2009 Dec 11. PLoS Comput Biol. 2009. PMID: 20011103 Free PMC article.
Viral metagenomics.
Edwards RA, Rohwer F. Edwards RA, et al. Nat Rev Microbiol. 2005 Jun;3(6):504-10. doi: 10.1038/nrmicro1163. Nat Rev Microbiol. 2005. PMID: 15886693 Review.
An application of statistics to comparative metagenomics.
Rodriguez-Brito B, Rohwer F, Edwards RA. Rodriguez-Brito B, et al. Among authors: edwards ra. BMC Bioinformatics. 2006 Mar 20;7:162. doi: 10.1186/1471-2105-7-162. BMC Bioinformatics. 2006. PMID: 16549025 Free PMC article.
Using pyrosequencing to shed light on deep mine microbial ecology.
Edwards RA, Rodriguez-Brito B, Wegley L, Haynes M, Breitbart M, Peterson DM, Saar MO, Alexander S, Alexander EC Jr, Rohwer F. Edwards RA, et al. BMC Genomics. 2006 Mar 20;7:57. doi: 10.1186/1471-2164-7-57. BMC Genomics. 2006. PMID: 16549033 Free PMC article.
The marine viromes of four oceanic regions.
Angly FE, Felts B, Breitbart M, Salamon P, Edwards RA, Carlson C, Chan AM, Haynes M, Kelley S, Liu H, Mahaffy JM, Mueller JE, Nulton J, Olson R, Parsons R, Rayhawk S, Suttle CA, Rohwer F. Angly FE, et al. Among authors: edwards ra. PLoS Biol. 2006 Nov;4(11):e368. doi: 10.1371/journal.pbio.0040368. PLoS Biol. 2006. PMID: 17090214 Free PMC article.
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.
Fierer N, Breitbart M, Nulton J, Salamon P, Lozupone C, Jones R, Robeson M, Edwards RA, Felts B, Rayhawk S, Knight R, Rohwer F, Jackson RB. Fierer N, et al. Among authors: edwards ra. Appl Environ Microbiol. 2007 Nov;73(21):7059-66. doi: 10.1128/AEM.00358-07. Epub 2007 Sep 7. Appl Environ Microbiol. 2007. PMID: 17827313 Free PMC article.
356 results