Eichler EE - Search Results

1

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes.

Hormozdiari F, Alkan C, Eichler EE, Sahinalp SC. Hormozdiari F, et al. Among authors: eichler ee. Genome Res. 2009 Jul;19(7):1270-8. doi: 10.1101/gr.088633.108. Epub 2009 May 15. Genome Res. 2009. PMID: 19447966 Free PMC article.

2

High-throughput variation detection and genotyping using microarrays.

Cutler DJ, Zwick ME, Carrasquillo MM, Yohn CT, Tobin KP, Kashuk C, Mathews DJ, Shah NA, Eichler EE, Warrington JA, Chakravarti A. Cutler DJ, et al. Among authors: eichler ee. Genome Res. 2001 Nov;11(11):1913-25. doi: 10.1101/gr.197201. Genome Res. 2001. PMID: 11691856 Free PMC article.

3

Divergent origins and concerted expansion of two segmental duplications on chromosome 16.

Eichler EE, Johnson ME, Alkan C, Tuzun E, Sahinalp C, Misceo D, Archidiacono N, Rocchi M. Eichler EE, et al. J Hered. 2001 Nov-Dec;92(6):462-8. doi: 10.1093/jhered/92.6.462. J Hered. 2001. PMID: 11948212

4

Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization.

Locke DP, Segraves R, Carbone L, Archidiacono N, Albertson DG, Pinkel D, Eichler EE. Locke DP, et al. Among authors: eichler ee. Genome Res. 2003 Mar;13(3):347-57. doi: 10.1101/gr.1003303. Genome Res. 2003. PMID: 12618365 Free PMC article.

5

Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome.

Liu G; NISC Comparative Sequencing Program; Zhao S, Bailey JA, Sahinalp SC, Alkan C, Tuzun E, Green ED, Eichler EE. Liu G, et al. Among authors: eichler ee. Genome Res. 2003 Mar;13(3):358-68. doi: 10.1101/gr.923303. Genome Res. 2003. PMID: 12618366 Free PMC article.

6

An algorithmic analysis of the role of unequal crossover in alpha-satellite DNA evolution.

Alkan C, Bailey JA, Eichler EE, Sahinalp SC, Tuzun E. Alkan C, et al. Among authors: eichler ee. Genome Inform. 2002;13:93-102. Genome Inform. 2002. PMID: 14571378

7

Analysis of segmental duplications and genome assembly in the mouse.

Bailey JA, Church DM, Ventura M, Rocchi M, Eichler EE. Bailey JA, et al. Among authors: eichler ee. Genome Res. 2004 May;14(5):789-801. doi: 10.1101/gr.2238404. Genome Res. 2004. PMID: 15123579 Free PMC article.

8

The structure and evolution of centromeric transition regions within the human genome.

She X, Horvath JE, Jiang Z, Liu G, Furey TS, Christ L, Clark R, Graves T, Gulden CL, Alkan C, Bailey JA, Sahinalp C, Rocchi M, Haussler D, Wilson RK, Miller W, Schwartz S, Eichler EE. She X, et al. Among authors: eichler ee. Nature. 2004 Aug 19;430(7002):857-64. doi: 10.1038/nature02806. Nature. 2004. PMID: 15318213

9

Identifying uniformly mutated segments within repeats.

Sahinalp SC, Eichler E, Goldberg P, Berenbrink P, Friedetzky T, Ergun F. Sahinalp SC, et al. J Bioinform Comput Biol. 2004 Dec;2(4):657-68. doi: 10.1142/s0219720004000788. J Bioinform Comput Biol. 2004. PMID: 15617159

10

The role of unequal crossover in alpha-satellite DNA evolution: a computational analysis.

Alkan C, Eichler EE, Bailey JA, Sahinalp SC, Tüzün E. Alkan C, et al. Among authors: eichler ee. J Comput Biol. 2004;11(5):933-44. doi: 10.1089/cmb.2004.11.933. J Comput Biol. 2004. PMID: 15700410

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