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Assembling the marine metagenome, one cell at a time.
Woyke T, Xie G, Copeland A, González JM, Han C, Kiss H, Saw JH, Senin P, Yang C, Chatterji S, Cheng JF, Eisen JA, Sieracki ME, Stepanauskas R. Woyke T, et al. Among authors: eisen ja. PLoS One. 2009;4(4):e5299. doi: 10.1371/journal.pone.0005299. Epub 2009 Apr 23. PLoS One. 2009. PMID: 19390573 Free PMC article.
Mauve assembly metrics.
Darling AE, Tritt A, Eisen JA, Facciotti MT. Darling AE, et al. Among authors: eisen ja. Bioinformatics. 2011 Oct 1;27(19):2756-7. doi: 10.1093/bioinformatics/btr451. Epub 2011 Aug 2. Bioinformatics. 2011. PMID: 21810901 Free PMC article.
Accounting for alignment uncertainty in phylogenomics.
Wu M, Chatterji S, Eisen JA. Wu M, et al. Among authors: eisen ja. PLoS One. 2012;7(1):e30288. doi: 10.1371/journal.pone.0030288. Epub 2012 Jan 17. PLoS One. 2012. PMID: 22272325 Free PMC article.
Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux.
Lynch EA, Langille MG, Darling A, Wilbanks EG, Haltiner C, Shao KS, Starr MO, Teiling C, Harkins TT, Edwards RA, Eisen JA, Facciotti MT. Lynch EA, et al. Among authors: eisen ja. PLoS One. 2012;7(7):e41389. doi: 10.1371/journal.pone.0041389. Epub 2012 Jul 24. PLoS One. 2012. PMID: 22848480 Free PMC article.
Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence.
Rands CM, Darling A, Fujita M, Kong L, Webster MT, Clabaut C, Emes RD, Heger A, Meader S, Hawkins MB, Eisen MB, Teiling C, Affourtit J, Boese B, Grant PR, Grant BR, Eisen JA, Abzhanov A, Ponting CP. Rands CM, et al. Among authors: eisen mb, eisen ja. BMC Genomics. 2013 Feb 12;14:95. doi: 10.1186/1471-2164-14-95. BMC Genomics. 2013. PMID: 23402223 Free PMC article.
443 results