Eisen MB - Search Results

1

Phylogenetic motif detection by expectation-maximization on evolutionary mixtures.

Moses AM, Chiang DY, Eisen MB. Moses AM, et al. Among authors: eisen mb. Pac Symp Biocomput. 2004:324-35. doi: 10.1142/9789812704856_0031. Pac Symp Biocomput. 2004. PMID: 14992514 Free article.

2

The transcriptional program of sporulation in budding yeast.

Chu S, DeRisi J, Eisen M, Mulholland J, Botstein D, Brown PO, Herskowitz I. Chu S, et al. Science. 1998 Oct 23;282(5389):699-705. doi: 10.1126/science.282.5389.699. Science. 1998. PMID: 9784122

3

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization.

Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B. Spellman PT, et al. Among authors: eisen mb. Mol Biol Cell. 1998 Dec;9(12):3273-97. doi: 10.1091/mbc.9.12.3273. Mol Biol Cell. 1998. PMID: 9843569 Free PMC article.

4

Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles.

Chiang DY, Brown PO, Eisen MB. Chiang DY, et al. Among authors: eisen mb. Bioinformatics. 2001;17 Suppl 1:S49-55. doi: 10.1093/bioinformatics/17.suppl_1.s49. Bioinformatics. 2001. PMID: 11472992

5

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.

Berman BP, Nibu Y, Pfeiffer BD, Tomancak P, Celniker SE, Levine M, Rubin GM, Eisen MB. Berman BP, et al. Among authors: eisen mb. Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):757-62. doi: 10.1073/pnas.231608898. Proc Natl Acad Sci U S A. 2002. PMID: 11805330 Free PMC article.

6

Identification of regulatory elements using a feature selection method.

Keleş S, van der Laan M, Eisen MB. Keleş S, et al. Among authors: eisen mb. Bioinformatics. 2002 Sep;18(9):1167-75. doi: 10.1093/bioinformatics/18.9.1167. Bioinformatics. 2002. PMID: 12217908

7

Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering.

Gasch AP, Eisen MB. Gasch AP, et al. Among authors: eisen mb. Genome Biol. 2002 Oct 10;3(11):RESEARCH0059. doi: 10.1186/gb-2002-3-11-research0059. Epub 2002 Oct 10. Genome Biol. 2002. PMID: 12429058 Free PMC article.

8

Phylogenetically and spatially conserved word pairs associated with gene-expression changes in yeasts.

Chiang DY, Moses AM, Kellis M, Lander ES, Eisen MB. Chiang DY, et al. Among authors: eisen mb. Genome Biol. 2003;4(7):R43. doi: 10.1186/gb-2003-4-7-r43. Epub 2003 Jun 26. Genome Biol. 2003. PMID: 12844359 Free PMC article.

9

Position specific variation in the rate of evolution in transcription factor binding sites.

Moses AM, Chiang DY, Kellis M, Lander ES, Eisen MB. Moses AM, et al. Among authors: eisen mb. BMC Evol Biol. 2003 Aug 28;3:19. doi: 10.1186/1471-2148-3-19. Epub 2003 Aug 28. BMC Evol Biol. 2003. PMID: 12946282 Free PMC article.

10

Benchmarking tools for the alignment of functional noncoding DNA.

Pollard DA, Bergman CM, Stoye J, Celniker SE, Eisen MB. Pollard DA, et al. Among authors: eisen mb. BMC Bioinformatics. 2004 Jan 21;5:6. doi: 10.1186/1471-2105-5-6. BMC Bioinformatics. 2004. PMID: 14736341 Free PMC article.

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