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Coot: model-building tools for molecular graphics.
Emsley P, Cowtan K. Emsley P, et al. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32. doi: 10.1107/S0907444904019158. Epub 2004 Nov 26. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15572765
The new CCP4 Coordinate Library as a toolkit for the design of coordinate-related applications in protein crystallography.
Krissinel EB, Winn MD, Ballard CC, Ashton AW, Patel P, Potterton EA, McNicholas SJ, Cowtan KD, Emsley P. Krissinel EB, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2250-5. doi: 10.1107/S0907444904027167. Epub 2004 Nov 26. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15572778
Developments in the CCP4 molecular-graphics project.
Potterton L, McNicholas S, Krissinel E, Gruber J, Cowtan K, Emsley P, Murshudov GN, Cohen S, Perrakis A, Noble M. Potterton L, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2288-94. doi: 10.1107/S0907444904023716. Epub 2004 Nov 26. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15572783
SPINE workshop on automated X-ray analysis: a progress report.
Bahar M, Ballard C, Cohen SX, Cowtan KD, Dodson EJ, Emsley P, Esnouf RM, Keegan R, Lamzin V, Langer G, Levdikov V, Long F, Meier C, Muller A, Murshudov GN, Perrakis A, Siebold C, Stein N, Turkenburg MG, Vagin AA, Winn M, Winter G, Wilson KS. Bahar M, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1170-83. doi: 10.1107/S0907444906032197. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001094 Review.
A knowledge-driven approach for crystallographic protein model completion.
Joosten K, Cohen SX, Emsley P, Mooij W, Lamzin VS, Perrakis A. Joosten K, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2008 Apr;64(Pt 4):416-24. doi: 10.1107/S0907444908001558. Epub 2008 Mar 19. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 18391408 Free PMC article.
Features and development of Coot.
Emsley P, Lohkamp B, Scott WG, Cowtan K. Emsley P, et al. Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24. Acta Crystallogr D Biol Crystallogr. 2010. PMID: 20383002 Free PMC article.
From crystal to structure with CCP4.
Cowtan K, Emsley P, Wilson KS. Cowtan K, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):233-4. doi: 10.1107/S0907444911007578. Epub 2011 Mar 18. Acta Crystallogr D Biol Crystallogr. 2011. PMID: 21460440 Free PMC article.
Overview of the CCP4 suite and current developments.
Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P, Evans PR, Keegan RM, Krissinel EB, Leslie AG, McCoy A, McNicholas SJ, Murshudov GN, Pannu NS, Potterton EA, Powell HR, Read RJ, Vagin A, Wilson KS. Winn MD, et al. Among authors: emsley p. Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42. doi: 10.1107/S0907444910045749. Epub 2011 Mar 18. Acta Crystallogr D Biol Crystallogr. 2011. PMID: 21460441 Free PMC article.
A new generation of crystallographic validation tools for the protein data bank.
Read RJ, Adams PD, Arendall WB 3rd, Brunger AT, Emsley P, Joosten RP, Kleywegt GJ, Krissinel EB, L├╝tteke T, Otwinowski Z, Perrakis A, Richardson JS, Sheffler WH, Smith JL, Tickle IJ, Vriend G, Zwart PH. Read RJ, et al. Among authors: emsley p. Structure. 2011 Oct 12;19(10):1395-412. doi: 10.1016/j.str.2011.08.006. Structure. 2011. PMID: 22000512 Free PMC article.
The use of molecular graphics in structure-based drug design.
Emsley P, Debreczeni JE. Emsley P, et al. Methods Mol Biol. 2012;841:143-59. doi: 10.1007/978-1-61779-520-6_6. Methods Mol Biol. 2012. PMID: 22222451
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