Erill I - Search Results

1

Parametric bootstrapping for biological sequence motifs.

O'Neill PK, Erill I. O'Neill PK, et al. Among authors: erill i. BMC Bioinformatics. 2016 Oct 6;17(1):406. doi: 10.1186/s12859-016-1246-8. BMC Bioinformatics. 2016. PMID: 27716039 Free PMC article.

2

A reexamination of information theory-based methods for DNA-binding site identification.

Erill I, O'Neill MC. Erill I, et al. BMC Bioinformatics. 2009 Feb 11;10:57. doi: 10.1186/1471-2105-10-57. BMC Bioinformatics. 2009. PMID: 19210776 Free PMC article.

3

Relative codon adaptation: a generic codon bias index for prediction of gene expression.

Fox JM, Erill I. Fox JM, et al. Among authors: erill i. DNA Res. 2010 Jun;17(3):185-96. doi: 10.1093/dnares/dsq012. Epub 2010 May 7. DNA Res. 2010. PMID: 20453079 Free PMC article.

4

BioWord: a sequence manipulation suite for Microsoft Word.

Anzaldi LJ, Muñoz-Fernández D, Erill I. Anzaldi LJ, et al. Among authors: erill i. BMC Bioinformatics. 2012 Jun 7;13:124. doi: 10.1186/1471-2105-13-124. BMC Bioinformatics. 2012. PMID: 22676326 Free PMC article.

5

Inference of self-regulated transcriptional networks by comparative genomics.

Cornish JP, Matthews F, Thomas JR, Erill I. Cornish JP, et al. Among authors: erill i. Evol Bioinform Online. 2012;8:449-61. doi: 10.4137/EBO.S9205. Epub 2012 Aug 6. Evol Bioinform Online. 2012. PMID: 23032607 Free PMC article.

6

scnRCA: a novel method to detect consistent patterns of translational selection in mutationally-biased genomes.

O'Neill PK, Or M, Erill I. O'Neill PK, et al. Among authors: erill i. PLoS One. 2013 Oct 7;8(10):e76177. doi: 10.1371/journal.pone.0076177. eCollection 2013. PLoS One. 2013. PMID: 24116094 Free PMC article.

7

CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria.

Kiliç S, White ER, Sagitova DM, Cornish JP, Erill I. Kiliç S, et al. Among authors: erill i. Nucleic Acids Res. 2014 Jan;42(Database issue):D156-60. doi: 10.1093/nar/gkt1123. Epub 2013 Nov 14. Nucleic Acids Res. 2014. PMID: 24234444 Free PMC article.

8

Characterization of the SOS meta-regulon in the human gut microbiome.

Cornish JP, Sanchez-Alberola N, O'Neill PK, O'Keefe R, Gheba J, Erill I. Cornish JP, et al. Among authors: erill i. Bioinformatics. 2014 May 1;30(9):1193-7. doi: 10.1093/bioinformatics/btt753. Epub 2014 Jan 8. Bioinformatics. 2014. PMID: 24407225 Free PMC article.

9

Informational requirements for transcriptional regulation.

O'Neill PK, Forder R, Erill I. O'Neill PK, et al. Among authors: erill i. J Comput Biol. 2014 May;21(5):373-84. doi: 10.1089/cmb.2014.0032. Epub 2014 Apr 1. J Comput Biol. 2014. PMID: 24689750 Free PMC article.

10

Identification and characterization of VpsR and VpsT binding sites in Vibrio cholerae.

Zamorano-Sánchez D, Fong JC, Kilic S, Erill I, Yildiz FH. Zamorano-Sánchez D, et al. Among authors: erill i. J Bacteriol. 2015 Apr;197(7):1221-35. doi: 10.1128/JB.02439-14. Epub 2015 Jan 26. J Bacteriol. 2015. PMID: 25622616 Free PMC article.

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