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Emergence of human-adapted Salmonella enterica is linked to the Neolithization process.
Nat Ecol Evol. 2020 Mar;4(3):324-333. doi: 10.1038/s41559-020-1106-9. Epub 2020 Feb 24.
Nat Ecol Evol. 2020.
PMID: 32094538
Free PMC article.
Paleomicrobiology: Diagnosis and Evolution of Ancient Pathogens.
Bos KI, Kühnert D, Herbig A, Esquivel-Gomez LR, Andrades Valtueña A, Barquera R, Giffin K, Kumar Lankapalli A, Nelson EA, Sabin S, Spyrou MA, Krause J.
Bos KI, et al. Among authors: esquivel gomez lr.
Annu Rev Microbiol. 2019 Sep 8;73:639-666. doi: 10.1146/annurev-micro-090817-062436. Epub 2019 Jul 5.
Annu Rev Microbiol. 2019.
PMID: 31283430
Review.
Item in Clipboard
Molecular Epidemiology and Transmission Dynamics of the HIV-1 Epidemic in Ethiopia: Epidemic Decline Coincided With Behavioral Interventions Before ART Scale-Up.
Arimide DA, Esquivel-Gómez LR, Kebede Y, Sasinovich S, Balcha T, Björkman P, Kühnert D, Medstrand P.
Arimide DA, et al. Among authors: esquivel gomez lr.
Front Microbiol. 2022 Feb 25;13:821006. doi: 10.3389/fmicb.2022.821006. eCollection 2022.
Front Microbiol. 2022.
PMID: 35283836
Free PMC article.
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Pervasive and non-random recombination in near full-length HIV genomes from Uganda.
Grant HE, Hodcroft EB, Ssemwanga D, Kitayimbwa JM, Yebra G, Esquivel Gomez LR, Frampton D, Gall A, Kellam P, de Oliveira T, Bbosa N, Nsubuga RN, Kibengo F, Kwan TH, Lycett S, Kao R, Robertson DL, Ratmann O, Fraser C, Pillay D, Kaleebu P, Leigh Brown AJ.
Grant HE, et al. Among authors: esquivel gomez lr.
Virus Evol. 2020 Feb 11;6(1):veaa004. doi: 10.1093/ve/veaa004. eCollection 2020 Jan.
Virus Evol. 2020.
PMID: 32395255
Free PMC article.
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Recombination-aware phylogenetic analysis sheds light on the evolutionary origin of SARS-CoV-2.
Esquivel Gomez LR, Weber A, Kocher A, Kühnert D.
Esquivel Gomez LR, et al.
Sci Rep. 2024 Jan 4;14(1):541. doi: 10.1038/s41598-023-50952-1.
Sci Rep. 2024.
PMID: 38177346
Free PMC article.
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Phylogenetic analysis of the origin and spread of plague in Madagascar.
Esquivel Gomez LR, Savin C, Andrianaivoarimanana V, Rahajandraibe S, Randriantseheno LN, Zhou Z, Kocher A, Didelot X, Rajerison M, Kühnert D.
Esquivel Gomez LR, et al.
PLoS Negl Trop Dis. 2023 May 1;17(5):e0010362. doi: 10.1371/journal.pntd.0010362. eCollection 2023 May.
PLoS Negl Trop Dis. 2023.
PMID: 37126517
Free PMC article.
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Genome Structure, Life Cycle, and Taxonomy of Coronaviruses and the Evolution of SARS-CoV-2.
Lamkiewicz K, Esquivel Gomez LR, Kühnert D, Marz M.
Lamkiewicz K, et al. Among authors: esquivel gomez lr.
Curr Top Microbiol Immunol. 2023;439:305-339. doi: 10.1007/978-3-031-15640-3_9.
Curr Top Microbiol Immunol. 2023.
PMID: 36592250
Review.
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