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Ruler elements in chromatin remodelers set nucleosome array spacing and phasing.
Oberbeckmann E, Niebauer V, Watanabe S, Farnung L, Moldt M, Schmid A, Cramer P, Peterson CL, Eustermann S, Hopfner KP, Korber P. Oberbeckmann E, et al. Among authors: farnung l. Nat Commun. 2021 May 28;12(1):3232. doi: 10.1038/s41467-021-23015-0. Nat Commun. 2021. PMID: 34050140 Free PMC article.
Nucleosomal arrangement affects single-molecule transcription dynamics.
Fitz V, Shin J, Ehrlich C, Farnung L, Cramer P, Zaburdaev V, Grill SW. Fitz V, et al. Among authors: farnung l. Proc Natl Acad Sci U S A. 2016 Nov 8;113(45):12733-12738. doi: 10.1073/pnas.1602764113. Epub 2016 Oct 24. Proc Natl Acad Sci U S A. 2016. PMID: 27791062 Free PMC article.
Mechanism of RNA polymerase II stalling by DNA alkylation.
Malvezzi S, Farnung L, Aloisi CMN, Angelov T, Cramer P, Sturla SJ. Malvezzi S, et al. Among authors: farnung l. Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):12172-12177. doi: 10.1073/pnas.1706592114. Epub 2017 Oct 30. Proc Natl Acad Sci U S A. 2017. PMID: 29087308 Free PMC article.
Structure of paused transcription complex Pol II-DSIF-NELF.
Vos SM, Farnung L, Urlaub H, Cramer P. Vos SM, et al. Among authors: farnung l. Nature. 2018 Aug;560(7720):601-606. doi: 10.1038/s41586-018-0442-2. Epub 2018 Aug 22. Nature. 2018. PMID: 30135580 Free PMC article.
The interaction landscape between transcription factors and the nucleosome.
Zhu F, Farnung L, Kaasinen E, Sahu B, Yin Y, Wei B, Dodonova SO, Nitta KR, Morgunova E, Taipale M, Cramer P, Taipale J. Zhu F, et al. Among authors: farnung l. Nature. 2018 Oct;562(7725):76-81. doi: 10.1038/s41586-018-0549-5. Epub 2018 Sep 24. Nature. 2018. PMID: 30250250 Free PMC article.
25 results