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MCA: Multiresolution Correlation Analysis, a graphical tool for subpopulation identification in single-cell gene expression data.
Feigelman J, Theis FJ, Marr C. Feigelman J, et al. BMC Bioinformatics. 2014 Jul 11;15:240. doi: 10.1186/1471-2105-15-240. BMC Bioinformatics. 2014. PMID: 25015590 Free PMC article.
Analysis of Cell Lineage Trees by Exact Bayesian Inference Identifies Negative Autoregulation of Nanog in Mouse Embryonic Stem Cells.
Feigelman J, Ganscha S, Hastreiter S, Schwarzfischer M, Filipczyk A, Schroeder T, Theis FJ, Marr C, Claassen M. Feigelman J, et al. Cell Syst. 2016 Nov 23;3(5):480-490.e13. doi: 10.1016/j.cels.2016.11.001. Cell Syst. 2016. PMID: 27883891 Free article.
Inference of spatiotemporal effects on cellular state transitions from time-lapse microscopy.
Strasser MK, Feigelman J, Theis FJ, Marr C. Strasser MK, et al. Among authors: feigelman j. BMC Syst Biol. 2015 Sep 21;9:61. doi: 10.1186/s12918-015-0208-5. BMC Syst Biol. 2015. PMID: 26391569 Free PMC article.
Network plasticity of pluripotency transcription factors in embryonic stem cells.
Filipczyk A, Marr C, Hastreiter S, Feigelman J, Schwarzfischer M, Hoppe PS, Loeffler D, Kokkaliaris KD, Endele M, Schauberger B, Hilsenbeck O, Skylaki S, Hasenauer J, Anastassiadis K, Theis FJ, Schroeder T. Filipczyk A, et al. Among authors: feigelman j. Nat Cell Biol. 2015 Oct;17(10):1235-46. doi: 10.1038/ncb3237. Epub 2015 Sep 21. Nat Cell Biol. 2015. PMID: 26389663
Software tools for single-cell tracking and quantification of cellular and molecular properties.
Hilsenbeck O, Schwarzfischer M, Skylaki S, Schauberger B, Hoppe PS, Loeffler D, Kokkaliaris KD, Hastreiter S, Skylaki E, Filipczyk A, Strasser M, Buggenthin F, Feigelman JS, Krumsiek J, van den Berg AJ, Endele M, Etzrodt M, Marr C, Theis FJ, Schroeder T. Hilsenbeck O, et al. Among authors: feigelman js. Nat Biotechnol. 2016 Jul 12;34(7):703-6. doi: 10.1038/nbt.3626. Nat Biotechnol. 2016. PMID: 27404877 No abstract available.
Combinatorial Histone Acetylation Patterns Are Generated by Motif-Specific Reactions.
Blasi T, Feller C, Feigelman J, Hasenauer J, Imhof A, Theis FJ, Becker PB, Marr C. Blasi T, et al. Among authors: feigelman j. Cell Syst. 2016 Jan 27;2(1):49-58. doi: 10.1016/j.cels.2016.01.002. Epub 2016 Jan 27. Cell Syst. 2016. PMID: 27136689 Free article.
gQSPSim: A SimBiology-Based GUI for Standardized QSP Model Development and Application.
Hosseini I, Feigelman J, Gajjala A, Susilo M, Ramakrishnan V, Ramanujan S, Gadkar K. Hosseini I, et al. Among authors: feigelman j. CPT Pharmacometrics Syst Pharmacol. 2020 Mar;9(3):165-176. doi: 10.1002/psp4.12494. Epub 2020 Mar 10. CPT Pharmacometrics Syst Pharmacol. 2020. PMID: 31957304 Free PMC article.
Age at initiation and frequency of screening to detect type 2 diabetes: a cost-effectiveness analysis.
Kahn R, Alperin P, Eddy D, Borch-Johnsen K, Buse J, Feigelman J, Gregg E, Holman RR, Kirkman MS, Stern M, Tuomilehto J, Wareham NJ. Kahn R, et al. Among authors: feigelman j. Lancet. 2010 Apr 17;375(9723):1365-74. doi: 10.1016/S0140-6736(09)62162-0. Epub 2010 Mar 29. Lancet. 2010. PMID: 20356621
The influence of myocardial substrate on ventricular fibrillation waveform: a swine model of acute and postmyocardial infarction.
Indik JH, Donnerstein RL, Hilwig RW, Zuercher M, Feigelman J, Kern KB, Berg MD, Berg RA. Indik JH, et al. Among authors: feigelman j. Crit Care Med. 2008 Jul;36(7):2136-42. doi: 10.1097/CCM.0b013e31817d798c. Crit Care Med. 2008. PMID: 18552696 Free PMC article.