Fernandez-Martinez J - Search Results

1

Optimized Affinity Capture of Yeast Protein Complexes.

LaCava J, Fernandez-Martinez J, Hakhverdyan Z, Rout MP. LaCava J, et al. Cold Spring Harb Protoc. 2016 Jul 1;2016(7). doi: 10.1101/pdb.prot087932. Cold Spring Harb Protoc. 2016. PMID: 27371596

2

Nuclear pore complex biogenesis.

Fernandez-Martinez J, Rout MP. Fernandez-Martinez J, et al. Curr Opin Cell Biol. 2009 Aug;21(4):603-12. doi: 10.1016/j.ceb.2009.05.001. Epub 2009 Jun 11. Curr Opin Cell Biol. 2009. PMID: 19524430 Free PMC article. Review.

3

Structure-function mapping of a heptameric module in the nuclear pore complex.

Fernandez-Martinez J, Phillips J, Sekedat MD, Diaz-Avalos R, Velazquez-Muriel J, Franke JD, Williams R, Stokes DL, Chait BT, Sali A, Rout MP. Fernandez-Martinez J, et al. J Cell Biol. 2012 Feb 20;196(4):419-34. doi: 10.1083/jcb.201109008. Epub 2012 Feb 13. J Cell Biol. 2012. PMID: 22331846 Free PMC article.

4

Molecular architecture and function of the SEA complex, a modulator of the TORC1 pathway.

Algret R, Fernandez-Martinez J, Shi Y, Kim SJ, Pellarin R, Cimermancic P, Cochet E, Sali A, Chait BT, Rout MP, Dokudovskaya S. Algret R, et al. Mol Cell Proteomics. 2014 Nov;13(11):2855-70. doi: 10.1074/mcp.M114.039388. Epub 2014 Jul 29. Mol Cell Proteomics. 2014. PMID: 25073740 Free PMC article.

5

Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex.

Kim SJ, Fernandez-Martinez J, Sampathkumar P, Martel A, Matsui T, Tsuruta H, Weiss TM, Shi Y, Markina-Inarrairaegui A, Bonanno JB, Sauder JM, Burley SK, Chait BT, Almo SC, Rout MP, Sali A. Kim SJ, et al. Mol Cell Proteomics. 2014 Nov;13(11):2911-26. doi: 10.1074/mcp.M114.040915. Epub 2014 Aug 19. Mol Cell Proteomics. 2014. PMID: 25139911 Free PMC article.

6

Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.

Shi Y, Fernandez-Martinez J, Tjioe E, Pellarin R, Kim SJ, Williams R, Schneidman-Duhovny D, Sali A, Rout MP, Chait BT. Shi Y, et al. Mol Cell Proteomics. 2014 Nov;13(11):2927-43. doi: 10.1074/mcp.M114.041673. Epub 2014 Aug 26. Mol Cell Proteomics. 2014. PMID: 25161197 Free PMC article.

7

A strategy for dissecting the architectures of native macromolecular assemblies.

Shi Y, Pellarin R, Fridy PC, Fernandez-Martinez J, Thompson MK, Li Y, Wang QJ, Sali A, Rout MP, Chait BT. Shi Y, et al. Nat Methods. 2015 Dec;12(12):1135-8. doi: 10.1038/nmeth.3617. Epub 2015 Oct 5. Nat Methods. 2015. PMID: 26436480 Free PMC article.

8

A Robust Workflow for Native Mass Spectrometric Analysis of Affinity-Isolated Endogenous Protein Assemblies.

Olinares PD, Dunn AD, Padovan JC, Fernandez-Martinez J, Rout MP, Chait BT. Olinares PD, et al. Anal Chem. 2016 Mar 1;88(5):2799-807. doi: 10.1021/acs.analchem.5b04477. Epub 2016 Feb 18. Anal Chem. 2016. PMID: 26849307 Free PMC article.

9

Native Elution of Yeast Protein Complexes Obtained by Affinity Capture.

LaCava J, Fernandez-Martinez J, Rout MP. LaCava J, et al. Cold Spring Harb Protoc. 2016 Jul 1;2016(7). doi: 10.1101/pdb.prot087940. Cold Spring Harb Protoc. 2016. PMID: 27371597

10

Density Gradient Ultracentrifugation to Isolate Endogenous Protein Complexes after Affinity Capture.

Fernandez-Martinez J, LaCava J, Rout MP. Fernandez-Martinez J, et al. Cold Spring Harb Protoc. 2016 Jul 1;2016(7). doi: 10.1101/pdb.prot087957. Cold Spring Harb Protoc. 2016. PMID: 27371598

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