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Evolutionary genomics of pathogenic bacteria.
Fitzgerald JR, Musser JM. Fitzgerald JR, et al. Trends Microbiol. 2001 Nov;9(11):547-53. doi: 10.1016/s0966-842x(01)02228-4. Trends Microbiol. 2001. PMID: 11825715 Review.
Time-Scaled Evolutionary Analysis of the Transmission and Antibiotic Resistance Dynamics of Staphylococcus aureus Clonal Complex 398.
Ward MJ, Gibbons CL, McAdam PR, van Bunnik BA, Girvan EK, Edwards GF, Fitzgerald JR, Woolhouse ME. Ward MJ, et al. Appl Environ Microbiol. 2014 Dec;80(23):7275-82. doi: 10.1128/AEM.01777-14. Epub 2014 Sep 19. Appl Environ Microbiol. 2014. PMID: 25239891 Free PMC article.
Genome-wide single nucleotide polymorphism-based assay for high-resolution epidemiological analysis of the methicillin-resistant Staphylococcus aureus hospital clone EMRSA-15.
Holmes A, McAllister G, McAdam PR, Hsien Choi S, Girvan K, Robb A, Edwards G, Templeton K, Fitzgerald JR. Holmes A, et al. Clin Microbiol Infect. 2014 Feb;20(2):O124-31. doi: 10.1111/1469-0691.12328. Epub 2013 Aug 9. Clin Microbiol Infect. 2014. PMID: 23927001
Evolutionary genomics of Staphylococcus aureus: insights into the origin of methicillin-resistant strains and the toxic shock syndrome epidemic.
Fitzgerald JR, Sturdevant DE, Mackie SM, Gill SR, Musser JM. Fitzgerald JR, et al. Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8821-6. doi: 10.1073/pnas.161098098. Epub 2001 Jul 10. Proc Natl Acad Sci U S A. 2001. PMID: 11447287 Free PMC article.
Population genetic structure of the Staphylococcus intermedius group: insights into agr diversification and the emergence of methicillin-resistant strains.
Bannoehr J, Ben Zakour NL, Waller AS, Guardabassi L, Thoday KL, van den Broek AH, Fitzgerald JR. Bannoehr J, et al. J Bacteriol. 2007 Dec;189(23):8685-92. doi: 10.1128/JB.01150-07. Epub 2007 Sep 28. J Bacteriol. 2007. PMID: 17905991 Free PMC article.
Population genomics of bacterial host adaptation.
Sheppard SK, Guttman DS, Fitzgerald JR. Sheppard SK, et al. Nat Rev Genet. 2018 Sep;19(9):549-565. doi: 10.1038/s41576-018-0032-z. Nat Rev Genet. 2018. PMID: 29973680 Review.
High-throughput sequencing for the study of bacterial pathogen biology.
McAdam PR, Richardson EJ, Fitzgerald JR. McAdam PR, et al. Curr Opin Microbiol. 2014 Jun;19(100):106-113. doi: 10.1016/j.mib.2014.06.002. Epub 2014 Jul 14. Curr Opin Microbiol. 2014. PMID: 25033019 Free PMC article.
Human origin for avian pathogenic Staphylococcus aureus.
Lowder BV, Fitzgerald JR. Lowder BV, et al. Virulence. 2010 Jul-Aug;1(4):283-4. doi: 10.4161/viru.1.4.11838. Virulence. 2010. PMID: 21178455
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