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miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades.
Friedländer MR, Mackowiak SD, Li N, Chen W, Rajewsky N. Friedländer MR, et al. Nucleic Acids Res. 2012 Jan;40(1):37-52. doi: 10.1093/nar/gkr688. Epub 2011 Sep 12. Nucleic Acids Res. 2012. PMID: 21911355 Free PMC article.
miR-184 Regulates Pancreatic β-Cell Function According to Glucose Metabolism.
Tattikota SG, Rathjen T, Hausser J, Khedkar A, Kabra UD, Pandey V, Sury M, Wessels HH, Mollet IG, Eliasson L, Selbach M, Zinzen RP, Zavolan M, Kadener S, Tschöp MH, Jastroch M, Friedländer MR, Poy MN. Tattikota SG, et al. Among authors: friedlander mr. J Biol Chem. 2015 Aug 14;290(33):20284-94. doi: 10.1074/jbc.M115.658625. Epub 2015 Jul 7. J Biol Chem. 2015. PMID: 26152724 Free PMC article.
Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks.
Bonath F, Domingo-Prim J, Tarbier M, Friedländer MR, Visa N. Bonath F, et al. Among authors: friedlander mr. Nucleic Acids Res. 2018 Dec 14;46(22):11869-11882. doi: 10.1093/nar/gky1107. Nucleic Acids Res. 2018. PMID: 30418607 Free PMC article.
Survey of 800+ data sets from human tissue and body fluid reveals xenomiRs are likely artifacts.
Kang W, Bang-Berthelsen CH, Holm A, Houben AJ, Müller AH, Thymann T, Pociot F, Estivill X, Friedländer MR. Kang W, et al. Among authors: friedlander mr. RNA. 2017 Apr;23(4):433-445. doi: 10.1261/rna.059725.116. Epub 2017 Jan 6. RNA. 2017. PMID: 28062594 Free PMC article.
Next-generation sequencing of the basal cell carcinoma miRNome and a description of novel microRNA candidates under neoadjuvant vismodegib therapy: an integrative molecular and surgical case study.
Sand M, Bechara FG, Gambichler T, Sand D, Friedländer MR, Bromba M, Schnabel R, Hessam S. Sand M, et al. Among authors: friedlander mr. Ann Oncol. 2016 Feb;27(2):332-8. doi: 10.1093/annonc/mdv551. Epub 2015 Nov 16. Ann Oncol. 2016. PMID: 26578727
Select microRNAs are essential for early development in the sea urchin.
Song JL, Stoeckius M, Maaskola J, Friedländer M, Stepicheva N, Juliano C, Lebedeva S, Thompson W, Rajewsky N, Wessel GM. Song JL, et al. Among authors: friedlander m. Dev Biol. 2012 Feb 1;362(1):104-13. doi: 10.1016/j.ydbio.2011.11.015. Epub 2011 Dec 3. Dev Biol. 2012. PMID: 22155525 Free PMC article.
Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery.
Li N, You X, Chen T, Mackowiak SD, Friedländer MR, Weigt M, Du H, Gogol-Döring A, Chang Z, Dieterich C, Hu Y, Chen W. Li N, et al. Among authors: friedlander mr. Nucleic Acids Res. 2013 Apr 1;41(6):3619-34. doi: 10.1093/nar/gkt072. Epub 2013 Feb 8. Nucleic Acids Res. 2013. PMID: 23396444 Free PMC article.
Deciphering the porcine intestinal microRNA transcriptome.
Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R. Sharbati S, et al. Among authors: friedlander mr. BMC Genomics. 2010 Apr 30;11:275. doi: 10.1186/1471-2164-11-275. BMC Genomics. 2010. PMID: 20433717 Free PMC article.
Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression.
Stoeckius M, Maaskola J, Colombo T, Rahn HP, Friedländer MR, Li N, Chen W, Piano F, Rajewsky N. Stoeckius M, et al. Among authors: friedlander mr. Nat Methods. 2009 Oct;6(10):745-51. doi: 10.1038/nmeth.1370. Epub 2009 Sep 6. Nat Methods. 2009. PMID: 19734907 Free PMC article.
A human snoRNA with microRNA-like functions.
Ender C, Krek A, Friedländer MR, Beitzinger M, Weinmann L, Chen W, Pfeffer S, Rajewsky N, Meister G. Ender C, et al. Among authors: friedlander mr. Mol Cell. 2008 Nov 21;32(4):519-28. doi: 10.1016/j.molcel.2008.10.017. Mol Cell. 2008. PMID: 19026782
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