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Visualization of pathogenicity regions in bacteria.
Friis C, Jensen LJ, Ussery DW. Friis C, et al. Genetica. 2000;108(1):47-51. doi: 10.1023/a:1004091626474. Genetica. 2000. PMID: 11145420
Genomics of an emerging clone of Salmonella serovar Typhimurium ST313 from Nigeria and the Democratic Republic of Congo.
Leekitcharoenphon P, Friis C, Zankari E, Svendsen CA, Price LB, Rahmani M, Herrero-Fresno A, Fashae K, Vandenberg O, Aarestrup FM, Hendriksen RS. Leekitcharoenphon P, et al. J Infect Dev Ctries. 2013 Oct 15;7(10):696-706. doi: 10.3855/jidc.3328. J Infect Dev Ctries. 2013. PMID: 24129621
Multilocus sequence typing of total-genome-sequenced bacteria.
Larsen MV, Cosentino S, Rasmussen S, Friis C, Hasman H, Marvig RL, Jelsbak L, Sicheritz-Pontén T, Ussery DW, Aarestrup FM, Lund O. Larsen MV, et al. J Clin Microbiol. 2012 Apr;50(4):1355-61. doi: 10.1128/JCM.06094-11. Epub 2012 Jan 11. J Clin Microbiol. 2012. PMID: 22238442 Free PMC article.
The Salmonella enterica pan-genome.
Jacobsen A, Hendriksen RS, Aaresturp FM, Ussery DW, Friis C. Jacobsen A, et al. Microb Ecol. 2011 Oct;62(3):487-504. doi: 10.1007/s00248-011-9880-1. Epub 2011 Jun 4. Microb Ecol. 2011. PMID: 21643699 Free PMC article. Review.
A virulent parent with probiotic progeny: comparative genomics of Escherichia coli strains CFT073, Nissle 1917 and ABU 83972.
Vejborg RM, Friis C, Hancock V, Schembri MA, Klemm P. Vejborg RM, et al. Mol Genet Genomics. 2010 May;283(5):469-84. doi: 10.1007/s00438-010-0532-9. Epub 2010 Mar 31. Mol Genet Genomics. 2010. PMID: 20354866
Genome organisation and chromatin structure in Escherichia coli.
Ussery D, Larsen TS, Wilkes KT, Friis C, Worning P, Krogh A, Brunak S. Ussery D, et al. Biochimie. 2001 Feb;83(2):201-12. doi: 10.1016/s0300-9084(00)01225-6. Biochimie. 2001. PMID: 11278070
Three views of microbial genomes.
Jensen LJ, Friis C, Ussery DW. Jensen LJ, et al. Res Microbiol. 1999 Nov-Dec;150(9-10):773-7. doi: 10.1016/s0923-2508(99)00116-3. Res Microbiol. 1999. PMID: 10673014
GenePublisher: Automated analysis of DNA microarray data.
Knudsen S, Workman C, Sicheritz-Ponten T, Friis C. Knudsen S, et al. Nucleic Acids Res. 2003 Jul 1;31(13):3471-6. doi: 10.1093/nar/gkg629. Nucleic Acids Res. 2003. PMID: 12824347 Free PMC article.
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