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Year Number of Results
2010 1
2013 3
2014 3
2015 5
2016 4
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2018 6
2019 4
2020 79
2021 209
2022 196
2023 134
2024 34

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Evolution of H6N6 viruses in China between 2014 and 2019 involves multiple reassortment events.
Du Y, Xia J, Wang Z, Xu J, Ji Y, Jin Y, Pu L, Xu S. Du Y, et al. Emerg Microbes Infect. 2024 Apr 6:2341142. doi: 10.1080/22221751.2024.2341142. Online ahead of print. Emerg Microbes Infect. 2024. PMID: 38581279 Free article.
To investigate the emergence, evolutionary pattern, and potential for an epidemic of H6N6 viruses, the complete genomes of 198 H6N6 viruses were analyzed, including 168 H6N6 viruses deposited in the NCBI and GISAID databases from inception to January 2019 and 30 isolates c …
To investigate the emergence, evolutionary pattern, and potential for an epidemic of H6N6 viruses, the complete genomes of 198 H6N6 viruses …
Dynamic analysis of SARS-CoV-2 evolution based on different countries.
Xiao B, Wu L, Sun Q, Shu C, Hu S. Xiao B, et al. Gene. 2024 Apr 3;916:148426. doi: 10.1016/j.gene.2024.148426. Online ahead of print. Gene. 2024. PMID: 38575101 Free article.
In this study, we conducted a comprehensive chronological analysis of SARS-CoV-2 evolution by examining mutation prevalence from the source countries of VOCs: United Kingdom, India, Brazil, South Africa, plus two countries: United States, Russia, utilizing genomic sequences from …
In this study, we conducted a comprehensive chronological analysis of SARS-CoV-2 evolution by examining mutation prevalence from the source …
Latin America and the Caribbean: Updated Surveillance Metrics and History of the COVID-19 Pandemic (2020-2023).
Post LA, Wu SA, Soetikno AG, Ozer E, Liu Y, Welch SB, Hawkins C, Moss C, Murphy R, Mason M, Havey RJ, Lundberg A. Post LA, et al. JMIR Public Health Surveill. 2024 Mar 20. doi: 10.2196/44398. Online ahead of print. JMIR Public Health Surveill. 2024. PMID: 38568194 Free article.
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), this study used data on sequenced SARS-CoV-2 variants from the Global Initiative on Sharing All Influenza Data (GISAID) to identify the …
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), thi …
European Surveillance and History of the COVID-19 Pandemic: Updated Epidemiological Assessment.
Lundberg A, Wu SA, Soetikno AG, Hawkins C, Murphy R, Havey RJ, Ozer E, Moss C, Welch SB, Mason M, Liu Y, Post LA. Lundberg A, et al. JMIR Public Health Surveill. 2024 Mar 20. doi: 10.2196/53551. Online ahead of print. JMIR Public Health Surveill. 2024. PMID: 38568186 Free article.
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), this study used data on sequenced SARS-CoV-2 variants from the Global Initiative on Sharing All Influenza Data (GISAID) to identify the …
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), thi …
Middle East and North Africa: Updated Surveillance Metrics and History of the COVID-19 Pandemic (2020-2023)This study updates the COVID-19 pandemic surveillance in the Middle East and North Africa we first conducted in 2020 with two additional years of data for the region.
Soetikno AG, Lundberg A, Ozer E, Wu SA, Welch SB, Mason M, Liu Y, Havey RJ, Murphy R, Hawkins C, Moss CB, Post LA. Soetikno AG, et al. JMIR Public Health Surveill. 2024 Mar 20. doi: 10.2196/53219. Online ahead of print. JMIR Public Health Surveill. 2024. PMID: 38568184 Free article.
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), this study used data on sequenced SARS-CoV-2 variants from the Global Initiative on Sharing All Influenza Data (GISAID) to identify the …
METHODS: In addition to updates of traditional surveillance data and dynamic panel estimates from the original study Post et al. (2021), thi …
Avian H6 Influenza Viruses in Vietnamese Live Bird Markets during 2018-2021.
Guan L, Babujee L, Presler R, Pattinson D, Nguyen HLK, Hoang VMP, Le MQ, Bakel HV, Kawaoka Y, Neumann G. Guan L, et al. Viruses. 2024 Feb 27;16(3):367. doi: 10.3390/v16030367. Viruses. 2024. PMID: 38543733 Free PMC article.
Yet, only 152 Vietnamese H6 virus sequences were available in GISAID (Global Initiative on Sharing All Influenza Data) prior to this study with the most recent sequences being from 2018. ...
Yet, only 152 Vietnamese H6 virus sequences were available in GISAID (Global Initiative on Sharing All Influenza Data) prior to this …
COVID-19 genome surveillance: A geographical landscape and mutational mapping of SARS-CoV-2 variants in central India over two years.
Khairnar K, Tomar SS. Khairnar K, et al. Virus Res. 2024 Mar 29;344:199365. doi: 10.1016/j.virusres.2024.199365. Online ahead of print. Virus Res. 2024. PMID: 38527669 Free PMC article.
The metadata of 3002 sequenced samples, including the FASTA sequence, was submitted to the Global Initiative on Sharing Avian Influenza Data (GISAID) and the Indian biological data centre (IBDC). This study identified 104 different SARS-CoV-2 pango-lineages classified into …
The metadata of 3002 sequenced samples, including the FASTA sequence, was submitted to the Global Initiative on Sharing Avian Influenza Data …
A comprehensive analysis of SARS-CoV-2 missense mutations indicates that all possible amino acid replacements in the viral proteins occurred within the first two-and-a-half years of the pandemic.
Balasco N, Damaggio G, Esposito L, Colonna V, Vitagliano L. Balasco N, et al. Int J Biol Macromol. 2024 Mar 24;266(Pt 1):131054. doi: 10.1016/j.ijbiomac.2024.131054. Online ahead of print. Int J Biol Macromol. 2024. PMID: 38522702 Free article.
The surveillance of COVID-19 pandemic has led to the determination of millions of genome sequences of the SARS-CoV-2 virus, with the accumulation of a wealth of information never collected before for an infectious disease. Exploring the information retrieved from the GISAID …
The surveillance of COVID-19 pandemic has led to the determination of millions of genome sequences of the SARS-CoV-2 virus, with the accumul …
Elucidating the evolution of monkeypox virus genomes through phylo-geo-network and haplogroup analysis.
Nasrin T, Samim Hassan M, Iqbal M, Yousif A, Hoque M, Ali N, Ali S. Nasrin T, et al. J Genet Eng Biotechnol. 2024 Mar;22(1):100346. doi: 10.1016/j.jgeb.2023.100346. Epub 2024 Jan 28. J Genet Eng Biotechnol. 2024. PMID: 38494259 Free PMC article.
RESULTS: Information about 719 full length genomes of MPXV were collected from GISAID repository and the sequences extracted from NCBI. The alignment of 719 MPXV genomes and their subsequent analysis revealed a total of 1530 segregating sites of which 330 were parsimony in …
RESULTS: Information about 719 full length genomes of MPXV were collected from GISAID repository and the sequences extracted from NCB …
643 results