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33 results
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The effect of replication initiation on gene amplification in the rDNA and its relationship to aging.
Ganley AR, Ide S, Saka K, Kobayashi T. Ganley AR, et al. Mol Cell. 2009 Sep 11;35(5):683-93. doi: 10.1016/j.molcel.2009.07.012. Mol Cell. 2009. PMID: 19748361
A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability.
Cahyani I, Cridge AG, Engelke DR, Ganley AR, O'Sullivan JM. Cahyani I, et al. Among authors: ganley ar. Mol Cell Biol. 2015 Feb;35(3):544-54. doi: 10.1128/MCB.01249-14. Epub 2014 Nov 24. Mol Cell Biol. 2015. PMID: 25421713 Free PMC article.
Monitoring the rate and dynamics of concerted evolution in the ribosomal DNA repeats of Saccharomyces cerevisiae using experimental evolution.
Ganley AR, Kobayashi T. Ganley AR, et al. Mol Biol Evol. 2011 Oct;28(10):2883-91. doi: 10.1093/molbev/msr117. Epub 2011 May 4. Mol Biol Evol. 2011. PMID: 21546356
Ribosomal DNA and cellular senescence: new evidence supporting the connection between rDNA and aging.
Ganley AR, Kobayashi T. Ganley AR, et al. FEMS Yeast Res. 2014 Feb;14(1):49-59. doi: 10.1111/1567-1364.12133. Epub 2014 Jan 21. FEMS Yeast Res. 2014. PMID: 24373458 Review.
Phylogenetic footprinting to find functional DNA elements.
Ganley AR, Kobayashi T. Ganley AR, et al. Methods Mol Biol. 2007;395:367-80. doi: 10.1007/978-1-59745-514-5_23. Methods Mol Biol. 2007. PMID: 17993686
Cellular senescence in yeast is regulated by rDNA noncoding transcription.
Saka K, Ide S, Ganley AR, Kobayashi T. Saka K, et al. Among authors: ganley ar. Curr Biol. 2013 Sep 23;23(18):1794-8. doi: 10.1016/j.cub.2013.07.048. Epub 2013 Aug 29. Curr Biol. 2013. PMID: 23993840
Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data.
Ganley AR, Kobayashi T. Ganley AR, et al. Genome Res. 2007 Feb;17(2):184-91. doi: 10.1101/gr.5457707. Epub 2007 Jan 2. Genome Res. 2007. PMID: 17200233 Free PMC article.
Identifying gene-independent noncoding functional elements in the yeast ribosomal DNA by phylogenetic footprinting.
Ganley AR, Hayashi K, Horiuchi T, Kobayashi T. Ganley AR, et al. Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11787-92. doi: 10.1073/pnas.0504905102. Epub 2005 Aug 4. Proc Natl Acad Sci U S A. 2005. PMID: 16081534 Free PMC article.
Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats.
Kobayashi T, Ganley AR. Kobayashi T, et al. Among authors: ganley ar. Science. 2005 Sep 2;309(5740):1581-4. doi: 10.1126/science.1116102. Science. 2005. PMID: 16141077
A positive role for yeast extrachromosomal rDNA circles? Extrachromosomal ribosomal DNA circle accumulation during the retrograde response may suppress mitochondrial cheats in yeast through the action of TAR1.
Poole AM, Kobayashi T, Ganley AR. Poole AM, et al. Among authors: ganley ar. Bioessays. 2012 Sep;34(9):725-9. doi: 10.1002/bies.201200037. Epub 2012 Jun 18. Bioessays. 2012. PMID: 22706794 Free PMC article. No abstract available.
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