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DoriC 10.0: an updated database of replication origins in prokaryotic genomes including chromosomes and plasmids.
Luo H, Gao F. Luo H, et al. Among authors: gao f. Nucleic Acids Res. 2019 Jan 8;47(D1):D74-D77. doi: 10.1093/nar/gky1014. Nucleic Acids Res. 2019. PMID: 30364951 Free PMC article.
Prediction of proteinase cleavage sites in polyproteins of coronaviruses and its applications in analyzing SARS-CoV genomes.
Gao F, Ou HY, Chen LL, Zheng WX, Zhang CT. Gao F, et al. FEBS Lett. 2003 Oct 23;553(3):451-6. doi: 10.1016/s0014-5793(03)01091-3. FEBS Lett. 2003. PMID: 14572668 Free PMC article.
GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequences.
Gao F, Zhang CT. Gao F, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W686-91. doi: 10.1093/nar/gkl040. Nucleic Acids Res. 2006. PMID: 16845098 Free PMC article.
DoriC: a database of oriC regions in bacterial genomes.
Gao F, Zhang CT. Gao F, et al. Bioinformatics. 2007 Jul 15;23(14):1866-7. doi: 10.1093/bioinformatics/btm255. Epub 2007 May 12. Bioinformatics. 2007. PMID: 17496319
Origins of replication in Sorangium cellulosum and Microcystis aeruginosa.
Gao F, Zhang CT. Gao F, et al. DNA Res. 2008 Jun 30;15(3):169-71. doi: 10.1093/dnares/dsn007. Epub 2008 May 12. DNA Res. 2008. PMID: 18477575 Free PMC article.
Prediction of replication time zones at single nucleotide resolution in the human genome.
Gao F, Zhang CT. Gao F, et al. FEBS Lett. 2008 Jul 9;582(16):2441-4. doi: 10.1016/j.febslet.2008.06.008. Epub 2008 Jun 12. FEBS Lett. 2008. PMID: 18555015
DeOri: a database of eukaryotic DNA replication origins.
Gao F, Luo H, Zhang CT. Gao F, et al. Bioinformatics. 2012 Jun 1;28(11):1551-2. doi: 10.1093/bioinformatics/bts151. Epub 2012 Mar 30. Bioinformatics. 2012. PMID: 22467915
DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes.
Gao F, Luo H, Zhang CT. Gao F, et al. Nucleic Acids Res. 2013 Jan;41(Database issue):D90-3. doi: 10.1093/nar/gks990. Epub 2012 Oct 23. Nucleic Acids Res. 2013. PMID: 23093601 Free PMC article.
DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements.
Luo H, Lin Y, Gao F, Zhang CT, Zhang R. Luo H, et al. Among authors: gao f. Nucleic Acids Res. 2014 Jan;42(Database issue):D574-80. doi: 10.1093/nar/gkt1131. Epub 2013 Nov 15. Nucleic Acids Res. 2014. PMID: 24243843 Free PMC article.
Recent Advances in the Identification of Replication Origins Based on the Z-curve Method.
Gao F. Gao F. Curr Genomics. 2014 Apr;15(2):104-12. doi: 10.2174/1389202915999140328162938. Curr Genomics. 2014. PMID: 24822028 Free PMC article.
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